FC877845

Overview
NameFC877845
Unique NameFC877845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.084e-25
Identity = 58/147 (39.46%), Postives = 88/147 (59.86%), Query Frame = 3
Query:  444 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            LP+  DWR KGAV  +K+Q  CGSCW+FS   A+E  N + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+Y +  GG+  +++YPY+      +CK  + ++  S+  F  V+ + +      V + P++V + A
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ--GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEA 135          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.028e-25
Identity = 78/233 (33.48%), Postives = 110/233 (47.21%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEF-------------------------RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 812
            F  F  K+N+ +A+Q+E   R   F++N     + QK D     G+ +FSDLT  EF                          +TYL  L++ L   +D D A +   N      DWR   +V  VKDQ +CG CW+FST G++EG       K   LS Q+L+DCD         S  +GC GGL+ SA+EY  K  GL+  +D P+   D+   C   K+K   SV ++ V
Sbjct:  125 FEEFNSKYNRRHATQQERLNRLVTFRSNYLEV-KEQKGDEPYVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPF--VDKARRCSVPKAK-KVSVPSYHV 338          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.999e-24
Identity = 76/243 (31.28%), Postives = 118/243 (48.56%), Query Frame = 3
Query:  201 FKKKFNKAYASQEEHDRRFTIFKANLRRAA---RRQKLDPSA-THGVTQFSDLTPAEFRRTYLGLRRKL-----RLPKDADQAPILPTN-----DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINAV 887
            +K K+ K Y+ +EE  +R  +++ N+++     R   L  +  T  +  F+D+T  EF+   +G +  +     RL K A      P +      LP   DWR +G V  V+ QG C SCW+F  TGA+EG  F  TGKL+ LS Q L+DC            + GC  G   +AF+Y L  GGL  E  YPY   +    C+++    +A +  F V+   ED +   +   GP+A  ++ +
Sbjct:   32 WKIKYEKLYSPEEEVLKR-VVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRA-LGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKP-------QGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE--GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVI 263          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.871e-22
Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = 3
Query:  447 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAV 872
            P   DWR+KGAV PVK+Q  CGSCW+FST   +EG N + TGKL+SLSEQ+L+DCD             GC GG    + +Y    GG+  E++YPY    +G     +K      +  +  V  +++      + N P++V
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQYVADNGGVHTEKEYPYE-KKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSV 133          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.871e-22
Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  312 SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL--DEDQIAAHLVKNGPLAVAINAV 887
            +A +GV QFS L P EF+  YLG +        A+    +P   LP  FDWR+K  V PV++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  +  +    L+ +  YP+   + G    F +S+   SV +FS  +    ED++A  L+  GPL V ++A+
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRPIPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVN-GQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAM 239          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.444e-22
Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 3
Query:  444 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            LP   DWR+KGAV PVK+QGSCGSCW+FST   +E  N + TG L+SLSEQ+LVDCD +         + GC GG    A++Y +  GG+  + +YPY        C+   SK+  S+  ++ V    +      V   P  VAI+A
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQ--GPCQ-AASKV-VSIDGYNGVPFCNEXALKQAVAVQPSTVAIDA 134          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.168e-22
Identity = 73/221 (33.03%), Postives = 106/221 (47.96%), Query Frame = 3
Query:  246 DRRFTIFKANLRRAARRQKLDPS----ATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV--VSLDEDQIAAHLVKNGPLAVAINAV 887
            +R    F+ +L R      L PS    A +G+ QFS L P EF+  YL  +        A+    +P   LP  FDWR+K  V  V++Q  CG CW+FS  GA+E A  +    L  LS QQ++DC +          + GCNGG   +A  +  K    L+++ +YP+     G    F  S    S+  +S    S  ED++A  L+  GPL V ++AV
Sbjct:   38 EREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFK-AQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAV 248          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  447 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            P   DWREKGAV PVK+Q  CGSCW+FST   +EG N + TG+L+SLSEQ+L+DC++            GC+GG    + +Y +   G+  E +YPY    +G     DK      +  +  V  +++      + N P++V  ++
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYE-KKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDS 136          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20
Identity = 68/226 (30.09%), Postives = 112/226 (49.56%), Query Frame = 3
Query:  216 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            N  + +  E  RR  IF  N R  A   + +         F+ +T  E+  + L L+R      +     I      P   DWR+KG V P++DQG+CGSC++F +  ALEG   +  G   + + LSE+ +V C  E         ++GCNGGL ++ + Y ++  G+ +E DYPYTG+D    C+ D  K  A + +++ V+ + +      +  G + V+I+A
Sbjct:   23 NNKHFTAVESLRRRAIFNMNARIVAENNRKETFKLSVDGPFAAMTNEEYN-SLLKLKRSGEEKGEVRYLNI----QAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTRE-------DGNNGCNGGLGSNVYNYIME-NGIAKESDYPYTGSD--STCRSD-VKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDA 232          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.303e-19
Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 3
Query:  444 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +P   DWR+ GAV  VK+QG CG CW+F+    +EG   +  G LV LSEQ+++DC          +   GC GG +N A+++ +   G+  +E+YPY        C  +    +A +  +S V  +++    + V N P+A  I+A
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQ--GTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDA 136          
The following BLAST results are available for this feature:
BLAST of FC877845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
ERVB_TABDI3.084e-2539.46Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP_THEPA4.028e-2533.48Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATQ_RAT1.999e-2431.28Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
MEX2_JACME1.871e-2237.32Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATO_MOUSE1.871e-2234.36Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
ERVC_TABDI2.444e-2240.82Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATO_HUMAN4.168e-2233.03Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
MEX1_JACME2.069e-2135.62Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CPP1_ENTHI5.096e-2030.09Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
MDO1_PSEMR3.303e-1932.65Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877845 ID=FC877845; Name=FC877845; organism=Citrus clementina; type=EST; length=893bp
CATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCT
CTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGA
TCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACC
ACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTA
TTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCG
TAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGA
AGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACT
CCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCT
GCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGG
CGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAG
GGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGG
TGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGC
TTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGAT
TCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAA
GGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATC
GTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCC
AACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCCATCTTGT
GAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATG
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