FC877845

Overview
NameFC877845
Unique NameFC877845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 88/241 (36.51%), Postives = 130/241 (53.94%), Query Frame = 3
Query:  168 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAAHLVKNGPLAVAINA 884
            DLL A  +F  F   FNK Y+S+ E   RF IF+ NL     +   D SA + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG+CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY   +    C+ + +K    V   +  V + E+++   L   GPL VAI+A
Sbjct:   20 DLLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD--CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDA 249          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 86/241 (35.68%), Postives = 133/241 (55.19%), Query Frame = 3
Query:  168 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAAHLVKNGPLAVAINA 884
            DLL A ++F  F  +FNK Y S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   ++         +  P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY   +    C+ + +K    V + +  +++ E+++   L   GP+ +AI+A
Sbjct:   20 DLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN--CRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDA 248          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 93/256 (36.33%), Postives = 132/256 (51.56%), Query Frame = 3
Query:  129 GDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAAHLVKNGPLAVAINA 884
            GD +L+  E  +N        F  +K ++NK Y+SQ+EHD RF  FKA  +  A     + S   G+  ++DL+  EF      ++ K+  P       +     L   P+  DWR +  V PVKDQG CGSCW+F +TG+LEG N +  G+LVSLSEQQLVDC         GS   GC GG  +SAF+Y ++ G L  E +YPY     G       +    S+  + +V S  E  +   +   GP+A+AI+A
Sbjct:  211 GDNLLAKEEQASN-------LFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTL---VKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDA 448          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 87/250 (34.80%), Postives = 138/250 (55.20%), Query Frame = 3
Query:  153 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRR--AARRQKLD-PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            E    +L  A  +F  F + +NK Y S  E ++R++IFK NL    A      D P+AT+ + +FSDL+ +E    + GL    R+        +  P +  P  FDWRE+  V  +K+QG+CG+CW+F+T  ++E    +   +L+ LSEQQL+DCD         S D GCNGGL+++AFE  ++ GG+  E DYP+ G  R   C  D+ +  + + V  +  V ++E+++   L   GP+ +AI+A
Sbjct:   43 EGAAYNLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVG--RNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDA 281          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 90/236 (38.14%), Postives = 122/236 (51.69%), Query Frame = 3
Query:  189 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL  EE YPY  TD  ++C +     AA+   F  +   E  +   +   GP++VAI+A
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDT-NSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDA 252          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 103/266 (38.72%), Postives = 133/266 (50.00%), Query Frame = 3
Query:  108 IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAAHLVKNGPLAVAINAV 887
            IR VTD     L   ES     LG   H   F+ F  ++ K+Y S  E  RRF IF  +L       +       G+ +FSD++  EF+ T LG  +        +   +     LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + GCNGGL + AFEY    GG+  EE YPY G +    C +     A  V    N ++ + DE + A  LV+  P++VA   +
Sbjct:   33 IRPVTDRAASTL---ESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN--GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVI 283          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.565e-35
Identity = 98/235 (41.70%), Postives = 125/235 (53.19%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAAHLVKNGPLAVAINAV 887
            F+ F  +  K Y S EE  +RF IF  NL+      +   S   G+ +F+DLT  EFR+  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF ++ I   V    N ++ +  E + A  LV+  P++VA   V
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG--KNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVV 278          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.565e-35
Identity = 89/252 (35.32%), Postives = 131/252 (51.98%), Query Frame = 3
Query:  180 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQK------------LDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAAHLVKNGPLAVAINAV 887
            +E +F  F +++NK+Y   +E+  R+ +FK NL +   + +            L  SA  GV +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D GCNGGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++   +   GP+A+A++A+
Sbjct:   53 SEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAM 293          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.565e-35
Identity = 84/218 (38.53%), Postives = 125/218 (57.34%), Query Frame = 3
Query:  189 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDED 830
            HF+ + K+  K Y+S+E +  R  +F  N R+     + + +   G+ QFSD++ AE +  YL        P++        +  T   P+  DWR+KG  V PVK+QG+CGSCW+FSTTGALE A  +A+GK+++L+EQQLVDC    +       + GC GGL + AFEY L   G+M E+ YPY G  +   CKF+  K  A V N   ++L+++
Sbjct:   32 HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG--KNGQCKFNPEKAVAFVKNVVNITLNDE 234          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.249e-34
Identity = 86/241 (35.68%), Postives = 133/241 (55.19%), Query Frame = 3
Query:  168 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAAHLVKNGPLAVAINA 884
            DLL A ++F  F  +FNK Y S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   ++         +  P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY   +    C+ + +K    V + +  +++ E+++   L   GP+ +AI+A
Sbjct:   20 DLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN--CRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDA 248          
The following BLAST results are available for this feature:
BLAST of FC877845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATV_NPVCD2.517e-3536.51Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVAC4.294e-3535.68Viral cathepsin OS=Autographa californica nuclear ... [more]
CFAD_DICDI5.608e-3536.33Counting factor associated protein D OS=Dictyostel... [more]
CATV_NPVLD5.608e-3534.80Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATL1_BOVIN5.608e-3538.14Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
ALEU_HORVU5.608e-3538.72Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP3_SOLLC9.565e-3541.70Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATV_NPVHZ9.565e-3535.32Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATH_RAT9.565e-3538.53Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATV_NPVRO1.249e-3435.68Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877845 ID=FC877845; Name=FC877845; organism=Citrus clementina; type=EST; length=893bp
CATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCT
CTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGA
TCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACC
ACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTA
TTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCG
TAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGA
AGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACT
CCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCT
GCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGG
CGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAG
GGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGG
TGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGC
TTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGAT
TCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAA
GGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATC
GTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCC
AACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCCATCTTGT
GAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATG
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