FC877870

Overview
NameFC877870
Unique NameFC877870
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: HCFC1_MESAU (Host cell factor 1 OS=Mesocricetus auratus GN=HCFC1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 80/259 (30.89%), Postives = 116/259 (44.79%), Query Frame = 3
Query:  195 VQPKSPQALVAQQLVSSEISSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGG-TDGMNPLRDLHILDTSSHTW----ISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSS---NTNDEVYYSDLYIL----NTETFVWKRATTSGNPPSARDSHTC------SSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHS 917
            V P +  A++ Q      +  SGP  R  H   A+     + VFGG G +    +++HV++T    W  P ++G  P    ++     G  L VFGG  +      DL+ L  S   W          G  P  R GHS +LVG + ++FGG    S     N   Y +DLYIL     +    W    T G  P  R+SHT        + K+K+++ GG  G    L D+  LD +TLTW + + SG+   PR+ HS
Sbjct:    5 VSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGG-GNEGI-VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSG--CRLGDLWTLDIETLTWNKPSLSGVAPLPRSLHS 259          

HSP 2 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 71/256 (27.73%), Postives = 105/256 (41.02%), Query Frame = 3
Query:  276 WGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIK----GSPPAPRDSHSCTTVGENLYVFGG--TDGMNP-------LRDLHILDTSSHT----WISPSVRGEGPEAREGHSAALVGKR------LFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHI---------------LDTDTLTWKELNTSGMVLS-PRAGHSHCA 926
            +G  C+    G  L VFGG  +    +N ++        W +   K    G PP PR  HS + VG   Y+FGG   D  +P       L DL+IL+    +    W  P   G  P  RE H+A +  ++      L I+GG              DL+ L+ ET  W + + SG  P  R  H+ ++  NK+ V GG       + DV +               L+ DT+ W+ +    +  + PRA   HCA
Sbjct:   85 YGFVCD----GTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCR-------LGDLWTLDIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGG--WVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCA 327          

HSP 3 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 3
Query:  315 LYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGM-----------------NPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGG-CGKSSNTNDEVYYSDLYILNTE 701
            L ++GG     C+   +   D    TW++P + G  P PR  HS TT+G  +YVFGG   +                 N L  L++   +  T +  ++    P AR GH A  +  RL+I+ G  G     N++V   DL+ L TE
Sbjct:  218 LVIYGGMS--GCRLGDLWTLDIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLETE 362          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: TYW23_ARATH (tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana GN=At4g04670 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = 3
Query:  255 SSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGG 803
            +  P  R GHT + +  G F++V GG        N V   D     WS     GS   PR  H+  +VG  +Y+FGG      +  +HILDT    W     +G+ P AR  H+    G + F+FGG       N E   +DLY  + ++  WK    SG  P AR SH+   +K+ I +IGG
Sbjct:  319 NESPSARLGHTASMV--GDFMFVIGGRADPLNILNDVWRLDISTGEWSSQRCVGSEFPPRHRHAAASVGTKVYIFGGLYNDKIVSSMHILDTKDLQWKEVEQQGQWPCARHSHAMVAYGSQSFMFGG------YNGENVLNDLYSFDVQSCSWKLEVISGKWPHARFSHSMFVYKHTIGIIGG 493          

HSP 2 Score: 92.8189 bits (229), Expect = 2.953e-18
Identity = 70/223 (31.39%), Postives = 110/223 (49.33%), Query Frame = 3
Query:  276 WGHTCNAIKGG--RFLYVFGGYGK--DNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGG-TDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHCAF 929
            WGH+   I     + + VFGG+G    + + N+  + +    T     +  SP A R  H+ + VG+ ++V GG  D +N L D+  LD S+  W S    G     R  H+AA VG +++IFGG       ND++  S ++IL+T+   WK     G  P AR SH   ++ ++  + GG +G +  L+D++  D  + +WK    SG    P A  SH  F
Sbjct:  270 WGHSACTIDESDRKEVIVFGGFGGFGRHARRNESLLLNPSCGTLKLIAVNESPSA-RLGHTASMVGDFMFVIGGRADPLNILNDVWRLDISTGEWSSQRCVGSEFPPRHRHAAASVGTKVYIFGGL-----YNDKIV-SSMHILDTKDLQWKEVEQQGQWPCARHSHAMVAYGSQSFMFGGYNGEN-VLNDLYSFDVQSCSWKLEVISGK--WPHARFSHSMF 482          

HSP 3 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 51/174 (29.31%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  282 HTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGG 803
            H   A   G  +Y+FGG   D    + +H+ DT +  W +   +G  P  R SH+    G   ++FGG +G N L DL+  D  S +W    + G+ P AR  HS  +    + I GGC  S N        +L +L+ +  +W+               T S   + +IVIGG
Sbjct:  377 HRHAAASVGTKVYIFGGLYNDKI-VSSMHILDTKDLQWKEVEQQGQWPCARHSHAMVAYGSQSFMFGGYNGENVLNDLYSFDVQSCSWKLEVISGKWPHARFSHSMFVYKHTIGIIGGCPVSQNC------QELTLLDLKHRLWRSVRLEFMNKELFVRSTASILGDDLIVIGG 543          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: RABEK_RAT (Rab9 effector protein with kelch motifs OS=Rattus norvegicus GN=Rabepk PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20
Identity = 61/207 (29.47%), Postives = 97/207 (46.86%), Query Frame = 3
Query:  315 LYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSH-SCTTVGENLYVFGGTD-GMNPLRD--LHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHC 923
            ++VFGG  +     N + V +   +TWS P + G PP+PR  H S   +G +LYVFGG + G  P++D  LH+ D ++ TW  P   G  P  R GH+    G +LFI GG         + ++ DL+ ++     W++   +G  P    +H   +  + + V GG       L+ ++   T+   W  L     +   R  HS C
Sbjct:  101 IWVFGGADQSG-NRNCLQVMNPEARTWSTPEVTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTKLFIHGGLA------GDRFFDDLHCIDIGDMSWQKLGPTGTAPVGCAAHAAVAVGHHVYVFGGMTATG-ALNTMYKYHTEKQHWTILQFDTSLPPGRLDHSMC 299          

HSP 2 Score: 96.2857 bits (238), Expect = 2.671e-19
Identity = 67/234 (28.63%), Postives = 105/234 (44.87%), Query Frame = 3
Query:  264 PGKRWGHTCN-------AIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSH-----SCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGH-SAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHCA 926
            P  R GH+C+       A KG  F+    G    N   + VH  D     W     +G    PR  H     SC+    +++VFGG D       L +++  + TW +P V G  P  R  H S+A +G  L++FGG  + +    +V    L++ +  T  W +  T G+PPS R  H   +   K+ + GG  G D +  D+H +D   ++W++L  +G      A H+  A
Sbjct:   28 PCPRVGHSCSYFPPVGEAEKGKVFIV---GGANPNQSFSDVHTMDLGTHRWDTATREGL--LPRYEHASFLPSCSP--HSIWVFGGADQSGNRNCLQVMNPEARTWSTPEVTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQPVQDV---KLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTKLFIHGGLAG-DRFFDDLHCIDIGDMSWQKLGPTGTAPVGCAAHAAVA 250          

HSP 3 Score: 94.3597 bits (233), Expect = 1.015e-18
Identity = 57/175 (32.57%), Postives = 78/175 (44.57%), Query Frame = 3
Query:  246 EISSSGPGKRWGHTCNAIKGGRFLYVFGG--YGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHT 764
            E++   P  R  HT +A  G   LYVFGG   G    Q  ++HVFD    TW+QP   GSPP+PR  H+    G  L++ GG  G     DLH +D    +W      G  P     H+A  VG  +++FGG   +   N       +Y  +TE   W       + P  R  H+
Sbjct:  130 EVTGCPPSPRTFHTSSAAIGNH-LYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTKLFIHGGLAGDRFFDDLHCIDIGDMSWQKLGPTGTAPVGCAAHAAVAVGHHVYVFGGMTATGALN------TMYKYHTEKQHWTILQFDTSLPPGRLDHS 297          

HSP 4 Score: 88.1965 bits (217), Expect = 7.274e-17
Identity = 61/191 (31.94%), Postives = 87/191 (45.55%), Query Frame = 3
Query:  393 WSQPVIKGSPPAPRDSHSCT---TVGE----NLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVG---KRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCS-SWKNKIIVIGGEDGHDYYLSDV--HILDTDTLTWKELNTSGMVLSPRAGHSHCA 926
            W      G  P PR  HSC+    VGE     +++ GG +      D+H +D  +H W   +   EG   R  H++ L       +++FGG  +S N N       L ++N E   W     +G PPS R  HT S +  N + V GG +     + DV  H+ D +TLTW +  T G   SPR GH+  A
Sbjct:   18 WYTLTCPGDKPCPRVGHSCSYFPPVGEAEKGKVFIVGGANPNQSFSDVHTMDLGTHRW--DTATREGLLPRYEHASFLPSCSPHSIWVFGGADQSGNRN------CLQVMNPEARTWSTPEVTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVA 200          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: RABEK_MOUSE (Rab9 effector protein with kelch motifs OS=Mus musculus GN=Rabepk PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20
Identity = 66/233 (28.33%), Postives = 108/233 (46.35%), Query Frame = 3
Query:  264 PGKRWGHTCNAI------KGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSH-----SCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGH-SAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHCA 926
            P  R GH+C+        + G+ +++ GG    N   + VH  D     W     +G    PR  H     SC+    +++VFGG D       L ++     TW +P V G  P  R  H S+A +G +L++FGG  + +   ++V    L++ +  T  W +  T G+PPS R  H   +   K+ + GG  G D +  D+H +D   ++W++L  +G V    A H+  A
Sbjct:   36 PCPRVGHSCSYFPPVGDAESGK-IFIVGG-ANPNQSFSDVHTMDLGTHQWDTATREGL--LPRYEHASFLPSCSP--HSIWVFGGADQSGNRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHTSSAAIGNQLYVFGGGERGAQPVEDV---KLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGTKLFIHGGLAG-DKFFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAAVA 258          

HSP 2 Score: 98.9821 bits (245), Expect = 4.121e-20
Identity = 61/207 (29.47%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  315 LYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSH-SCTTVGENLYVFGGTD-GMNPLRD--LHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHC 923
            ++VFGG  +     N + V    ++TWS P + GSPP+PR  H S   +G  LYVFGG + G  P+ D  LH+ D ++ TW  P   G  P  R GH     G +LFI GG         + ++ DL+ ++     W++   +G  P    +H   +  + + + GG       L+ ++   T+   W  L     + + R  HS C
Sbjct:  109 IWVFGGADQSG-NRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHTSSAAIGNQLYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGTKLFIHGGLA------GDKFFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHVYMFGGMTATG-ALNMMYKYHTEKQHWTVLQFDTSLPAGRLDHSMC 307          

HSP 3 Score: 93.5893 bits (231), Expect = 1.731e-18
Identity = 58/175 (33.14%), Postives = 80/175 (45.71%), Query Frame = 3
Query:  246 EISSSGPGKRWGHTCNAIKGGRFLYVFGG--YGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHT 764
            E++ S P  R  HT +A  G + LYVFGG   G    +  ++HVFD    TWSQP   GSPP+PR  H     G  L++ GG  G     DLH +D    +W      G  P     H+A  VG  +++FGG   +   N       +Y  +TE   W       + P+ R  H+
Sbjct:  138 EVTGSPPSPRTFHTSSAAIGNQ-LYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGTKLFIHGGLAGDKFFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHVYMFGGMTATGALN------MMYKYHTEKQHWTVLQFDTSLPAGRLDHS 305          

HSP 4 Score: 88.5817 bits (218), Expect = 5.570e-17
Identity = 59/188 (31.38%), Postives = 88/188 (46.81%), Query Frame = 3
Query:  390 TWSQPVIKGSPPAPRDSHSCT---TVGE----NLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVG---KRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCS-SWKNKIIVIGGEDGHDYYLSDV--HILDTDTLTWKELNTSGMVLSPRAGH 914
            TW      G  P PR  HSC+    VG+     +++ GG +      D+H +D  +H W   +   EG   R  H++ L       +++FGG  +S N N       L +++ E   W     +G+PPS R  HT S +  N++ V GG +     + DV  H+ D +TLTW +  T G   SPR GH
Sbjct:   25 TWYTLTCPGDRPCPRVGHSCSYFPPVGDAESGKIFIVGGANPNQSFSDVHTMDLGTHQW--DTATREGLLPRYEHASFLPSCSPHSIWVFGGADQSGNRN------CLQVMSPEDRTWSTPEVTGSPPSPRTFHTSSAAIGNQLYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGH 204          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: RABEK_DANRE (Rab9 effector protein with kelch motifs OS=Danio rerio GN=rabepk PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.489e-19
Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  240 SSEISSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTN-QVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHT 764
            S +++   P  R  HT +A  G R     GG    +  T+ Q+HVFD V+ TW+QP   G+PPA R  H  T VG ++Y+ GG  G     D+  L+T S  W     +G+ P     HS+    K +FIFGG      TN       ++    +   W      G+ P  R  H+
Sbjct:  138 SVQVTGVPPSGRTYHTNSACVGNRLFVFSGGEAGSSAVTDAQLHVFDAVSVTWTQPDTTGTPPAQRHGHVITAVGSDIYIHGGMSGEKFHSDMFTLNTESLKWQKVKAKGDLPPGVAAHSSVTFNKNIFIFGGMTADGATN------SMFKFQCDKQRWTLLKFEGDLPPGRLDHS 307          

HSP 2 Score: 91.6633 bits (226), Expect = 6.579e-18
Identity = 64/211 (30.33%), Postives = 94/211 (44.55%), Query Frame = 3
Query:  315 LYVFGGYGKD---NC-QTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTT-VGENLYVF-GGTDGMNPLRD--LHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHC 923
            L+VFGG  K    NC Q  +        + W    + G PP+ R  H+ +  VG  L+VF GG  G + + D  LH+ D  S TW  P   G  P  R GH    VG  ++I GG       + E ++SD++ LNTE+  W++    G+ P    +H+  ++   I + GG    D   + +     D   W  L   G +   R  HS C
Sbjct:  106 LWVFGGAEKSTNRNCVQALRFSDGGEGRRFWQSVQVTGVPPSGRTYHTNSACVGNRLFVFSGGEAGSSAVTDAQLHVFDAVSVTWTQPDTTGTPPAQRHGHVITAVGSDIYIHGGM------SGEKFHSDMFTLNTESLKWQKVKAKGDLPPGVAAHSSVTFNKNIFIFGGMTA-DGATNSMFKFQCDKQRWTLLKFEGDLPPGRLDHSMC 309          

HSP 3 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 67/247 (27.13%), Postives = 110/247 (44.53%), Query Frame = 3
Query:  246 EISSSGPGKRWGHTCNAIK---------GGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGE--NLYVFGGTD---GMNPLRDLHILDTSS--HTWISPSVRGEGPEAREGHS-AALVGKRLFIFGG--CGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHCAF 929
            E + + PG   GHTC+ +          GG+   V  G    +      ++ +     W  P  +G   A  +  S T   E  +L+VFGG +     N ++ L   D       W S  V G  P  R  H+ +A VG RLF+F G   G S+ T+     + L++ +  +  W +  T+G PP+ R  H  ++  + I + GG  G  ++ SD+  L+T++L W+++   G +    A HS   F
Sbjct:   22 EPTGAAPGVSVGHTCSFLPAAHHHDEDGGGKGKIVIVGGANPSGSFADSYIINLDTHQWDLPDWEGLQ-ARYEHCSFTPESEPQSLWVFGGAEKSTNRNCVQALRFSDGGEGRRFWQSVQVTGVPPSGRTYHTNSACVGNRLFVFSGGEAGSSAVTD-----AQLHVFDAVSVTWTQPDTTGTPPAQRHGHVITAVGSDIYIHGGMSGEKFH-SDMFTLNTESLKWQKVKAKGDLPPGVAAHSSVTF 261          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: KLDC2_BOVIN (Kelch domain-containing protein 2 OS=Bos taurus GN=KLHDC2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.951e-19
Identity = 64/247 (25.91%), Postives = 108/247 (43.72%), Query Frame = 3
Query:  264 PGKRWGHTCNAIKGGRFLYVFGGYGKDNCQ--------TNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHT----WISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKS-----------------SNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHS 917
            P +R GH   A+  GR ++V+GGY  +  +          ++ +++     W +   +G  P          V   LY+FGG          ++LD+ S      W     +G  P +++     +   +L  FGG G                   ++++   +   ++IL+TETF+W +  T+G PPS R +H C++  NK  V GG    D  ++D+H L+ DT  W EL   G+    R+ HS
Sbjct:   29 PAERSGHV--AVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLHWERIDCQGVPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFIWSQPITTGKPPSPRAAHACATVGNKGFVFGGRY-RDARMNDLHYLNLDTWEWNELIPQGICPVGRSWHS 272          

HSP 2 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 49/150 (32.67%), Postives = 68/150 (45.33%), Query Frame = 3
Query:  357 NQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGK-RLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGG 803
            + VH+ DT    WSQP+  G PP+PR +H+C TVG   +VFGG      + DLH L+  +  W     +G  P  R  HS   V    LF+FGG      T D+   SD +        W +               C+S + ++IV GG
Sbjct:  193 DHVHILDTETFIWSQPITTGKPPSPRAAHACATVGNKGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGICPVGRSWHSLTPVSSDHLFLFGGF-----TTDKQPLSDAWTYCISKNEWIKFNHPHTEKPRLWHTACASDEGEVIVFGG 337          

HSP 3 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 59/203 (29.06%), Postives = 87/203 (42.86%), Query Frame = 3
Query:  423 PAPRDSHSCTTVGENLYVFGGT---------DGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTET----FVWKRATTSGNPPSARDSHTCSSWKNKIIVIGG---------------------EDGHDYYLSD-VHILDTDTLTWKELNTSGMVLSPRAGHSHCA 926
            PA R  H   + G +++V+GG          D   P  +L I +  +  W   +  G+ P +  G  A  V + L++FGG     NTN        Y+L++ +      W+R    G PPS++D      +KNK+I  GG                        H    +D VHILDT+T  W +  T+G   SPRA H+ CA
Sbjct:   29 PAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNK------FYMLDSRSTDRVLHWERIDCQGVPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFIWSQPITTGKPPSPRAAHA-CA 224          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: KLDC1_HUMAN (Kelch domain-containing protein 1 OS=Homo sapiens GN=KLHDC1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.951e-19
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 3
Query:  357 NQVHVFDTVNQTWSQPVIKGS-PPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHILDTSSHTWISP-SVRGEGPEAREGHS-AALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDS--HT-CSSWKNKIIVIGG 803
            N VH+FDT  QTW QP IKG  PP PR +H+C  +G   Y+FGG      + DLH L+  + TW    ++ GE P+ R  H+   +   +LF+ GG      + D +  SD +I N  T  WK+ T   + P  R    HT C   +N+I+V GG
Sbjct:  171 NDVHIFDTKTQTWFQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRITINGESPKHRSWHTLTPIADDKLFLCGGL-----SADNIPLSDGWIHNVTTNCWKQLT---HLPKTRPRLWHTACLGKENEIMVFGG 317          

HSP 2 Score: 94.3597 bits (233), Expect = 1.015e-18
Identity = 78/260 (30.00%), Postives = 117/260 (45.00%), Query Frame = 3
Query:  234 LVSSEISSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFD--TVNQTWSQPVI---KGSPPAPRDSHSCTTVGENLYVFGGTDGMNPL----------------------RDLHILDTSSHTWISPSVR-GEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWK-RATTSGNPPSARDSHTCSS-WKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHSHC 923
            L+  E+ +S  G     +C A   G+ LY+FGGY  D   +N+++  +  T ++T+    I   +G PP PRD  SC    + L  FGG                              D+HI DT + TW  P ++ G  P+ R  H+ A++G + +IFGG    +  N      DL+ LN +T+ W  R T +G  P  R  HT +    +K+ + GG    +  LSD  I +  T  WK+L T      PR  H+ C
Sbjct:   60 LMEGELPASMSG-----SCGACINGK-LYIFGGYD-DKGYSNRLYFVNLRTRDETYIWEKITDFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHSELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQTWFQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMN------DLHYLNLDTWTWSGRITINGESPKHRSWHTLTPIADDKLFLCGGLSADNIPLSDGWIHNVTTNCWKQL-THLPKTRPRLWHTAC 305          

HSP 3 Score: 81.2629 bits (199), Expect = 8.892e-15
Identity = 65/226 (28.76%), Postives = 101/226 (44.69%), Query Frame = 3
Query:  270 KRWGHTCNAIKGGRFLYVFGGYG--KDN---CQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGGTDGMNPLRDLHI--LDTSSHTWISPSV---RGEGPEAREGHSAALVGKRLFIFG--GCGKSSNTNDEV--------------YYSDLYILNTETFVWKRATTSGN-PPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTW 866
            +R GH   A+  G FLYV+GGY   +DN      +++  +D  +  W   +++G  PA         +   LY+FGG D       L+   L T   T+I   +    G+ P  R+  S  +   RL  FG  GC + S   D                +++D++I +T+T  W +    G  PP  R +HTC+   NK  + GG       ++D+H L+ DT TW
Sbjct:   12 ERSGHC--AVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWRMHLMEGELPASMSGSCGACINGKLYIFGGYDDKGYSNRLYFVNLRTRDETYIWEKITDFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHSELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQTWFQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGR-VLQTRMNDLHYLNLDTWTW 234          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: KLDC4_HUMAN (Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.015e-18
Identity = 80/286 (27.97%), Postives = 128/286 (44.76%), Query Frame = 3
Query:  150 SRKEK*ILKKMRWEKVQPKSP----QALVAQQLVSSEISSSGPGKRWGHTCNAIKGGRFLYVFGGY---GKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTV---GENLYVFGGT------DGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCS-SWKNKIIVIGGEDGH-------------DYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHS 917
            ++ EK + K+ R E+   ++     Q L A++  + E+    P  R   + +       L +FGG    G+     N+++V++T   TW++  I  SPP  R +H    V   G  L+VFGG       +     +DL +L  ++ TW      G GP  R GH      ++L +FGG  +S  T D +YY+D+Y  N +TF W + + SG  P+ R     S + +  I+V GG                 D +L        D   W  +N SG+  +PR+G S
Sbjct:   19 AKMEKKVSKRSRKEEEDLEALIAHFQTLDAKRTQTVELPCPPPSPRLNASLSVHPEKDELILFGGEYFNGQKTFLYNELYVYNTRKDTWTKVDIP-SPPPRRCAHQAVVVPQGGGQLWVFGGEFASPNGEQFYHYKDLWVLHLATKTWEQVKSTG-GPSGRSGHRMVAWKRQLILFGGFHES--TRDYIYYNDVYAFNLDTFTWSKLSPSGTGPTPRSGCQMSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTRMNPSGVKPTPRSGFS 300          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: HCFC2_RAT (Host cell factor 2 OS=Rattus norvegicus GN=Hcfc2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.261e-18
Identity = 73/240 (30.42%), Postives = 106/240 (44.17%), Query Frame = 3
Query:  252 SSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGG-TDGMNPLRDLHILDTSSHTW----ISPSVRGEGPEAREGHSAALVGKRLFIFGGC---GKSSNTNDEVYYSDLYILNTE----TFVWKRATTSGNPPSARDSHTC------SSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHS 917
            S +GP  R  H   A+     + +FGG G +    +++HV++TV   W  P ++G  P    +H     G  + VFGG  +      +L+ L  S   W      P   G  P  R GHS +L G + ++F G     + SN N   Y +D Y L  +       W    T G  PS R+SHT        S   K+ V GG  G    L D+  LD +T++W +  T G V  PR+ H+
Sbjct:   14 SFTGPVPRARHGHRAVAIRELMIIFGG-GNEGI-ADELHVYNTVTNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPQPPPSGLPPCPRLGHSFSLYGNKCYLFAGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSVPATKGTVPSPRESHTAVIYCKRDSGSPKMYVFGGMCG--ARLDDLWQLDLETMSWSKPETKGTVPLPRSLHT 249          

HSP 2 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 70/248 (28.23%), Postives = 96/248 (38.71%), Query Frame = 3
Query:  306 GRFLYVFGGYGKDNCQTNQVHVFDTVNQTWS----QPVIKGSPPAPRDSHSCTTVGENLYVFGGT-----DGMNP----LRDLHILDTSSHT----WISPSVRGEGPEAREGHSAALVGKR------LFIFGG-CGKSSNTNDEVYYSDLYILNTETFVWKRATTSGNPPSARDSHTCSSWKNKIIVIGG----------EDGHD---YYLSDVHILDTDTLTWKELNTSGMV----LSPRAGHSHCA 926
            G  + VFGG  +    +N+++        W     QP   G PP PR  HS +  G   Y+F G      D  N     L D + L+    +    W  P+ +G  P  RE H+A +  KR      +++FGG CG   +        DL+ L+ ET  W +  T G  P  R  HT S   NK+ + GG             HD      S    L+ DT  W  L +          PR    HCA
Sbjct:   81 GTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPQPPPSGLPPCPRLGHSFSLYGNKCYLFAGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSVPATKGTVPSPRESHTAVIYCKRDSGSPKMYVFGGMCGARLD--------DLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTENSPHDCEWRCTSSFSYLNLDTAEWTTLVSDSQEDKKNSRPRPRAGHCA 320          
BLAST of FC877870 vs. ExPASy Swiss-Prot
Match: HCFC2_HUMAN (Host cell factor 2 OS=Homo sapiens GN=HCFC2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.953e-18
Identity = 73/240 (30.42%), Postives = 106/240 (44.17%), Query Frame = 3
Query:  252 SSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQTWSQPVIKGSPPAPRDSHSCTTVGENLYVFGG-TDGMNPLRDLHILDTSSHTWIS----PSVRGEGPEAREGHSAALVGKRLFIFGGC---GKSSNTNDEVYYSDLYILNTE----TFVWKRATTSGNPPSARDSHTC------SSWKNKIIVIGGEDGHDYYLSDVHILDTDTLTWKELNTSGMVLSPRAGHS 917
            S +GP  R  H   A+     + +FGG G +    +++HV++T    W  P ++G  P    +H     G  + VFGG  +      +L+ L  S   W      P   G  P  R GHS +L G + ++FGG     + SN N   Y +D Y L  +       W    T G  PS R+SHT        S   K+ V GG  G    L D+  LD +T++W +  T G V  PR+ H+
Sbjct:   14 SFTGPVPRARHGHRAVAIRELMIIFGG-GNEGI-ADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCG--ARLDDLWQLDLETMSWSKPETKGTVPLPRSLHT 249          

HSP 2 Score: 76.2554 bits (186), Expect = 2.861e-13
Identity = 70/262 (26.72%), Postives = 104/262 (39.69%), Query Frame = 3
Query:  186 WEKVQPKSPQALVAQQLVSSEISSSGPGKRWGHTCNAIKGGRFLYVFGGYGKDNCQTNQVHVFDTVNQT-------------WSQPVIKGSPPAPRDSHSCTTV------GENLYVFGGTDGMNPLRDLHILDTSSHTWISPSVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNTNDEV--------YYSDLYILNTETFVW------KRATTSGNPPSARDSHTCSSWKNKIIVIGGEDGHDYYLS------DVHILDTD 854
            W+KV+P  P             S   P  R GH+ +    G   Y+FGG   ++  +N  +V   +N               WS PV KG  P+PR+SH+             +YVFGG  G   L DL  LD  + +W  P  +G  P  R  H+A+++G +++IFGG       N E           S    LN +T  W       +     + P  R  H   +   ++    G DG+   L+      D+  LDT+
Sbjct:  110 WKKVKPHPPP------------SGLPPCPRLGHSFSLY--GNKCYLFGGLANESEDSNN-NVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGAR-LDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTE 355          
The following BLAST results are available for this feature:
BLAST of FC877870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
HCFC1_MESAU6.358e-2130.89Host cell factor 1 OS=Mesocricetus auratus GN=HCFC... [more]
TYW23_ARATH8.304e-2133.33tRNA wybutosine-synthesizing protein 2/3/4 OS=Arab... [more]
RABEK_RAT1.850e-2029.47Rab9 effector protein with kelch motifs OS=Rattus ... [more]
RABEK_MOUSE1.850e-2028.33Rab9 effector protein with kelch motifs OS=Mus mus... [more]
RABEK_DANRE3.489e-1931.82Rab9 effector protein with kelch motifs OS=Danio r... [more]
KLDC2_BOVIN5.951e-1925.91Kelch domain-containing protein 2 OS=Bos taurus GN... [more]
KLDC1_HUMAN5.951e-1938.06Kelch domain-containing protein 1 OS=Homo sapiens ... [more]
KLDC4_HUMAN1.015e-1827.97Kelch domain-containing protein 4 OS=Homo sapiens ... [more]
HCFC2_RAT2.261e-1830.42Host cell factor 2 OS=Rattus norvegicus GN=Hcfc2 P... [more]
HCFC2_HUMAN2.953e-1830.42Host cell factor 2 OS=Homo sapiens GN=HCFC2 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877870 ID=FC877870; Name=FC877870; organism=Citrus clementina; type=EST; length=929bp
CTCATTTATTTATTTATCTATTTATTTATTTTCTGCATGAACTCAAAATC
CACTTAATCACCATAAATTAAAAAAAAAAAAACCCCCATTTCTCCCTTCT
GCCACTTTCTCGAGAAAATTTTTGAACTTTCTGATAAACTGGAGATTTTT
CTCGGAAAGAAAAATAAATTTTGAAAAAAATGAGGTGGGAAAAGGTCCAG
CCGAAGAGCCCACAAGCATTAGTGGCTCAACAATTAGTCTCAAGTGAAAT
ATCAAGTTCAGGTCCAGGCAAGAGATGGGGCCACACTTGCAACGCCATTA
AAGGAGGCAGATTTCTTTATGTTTTTGGTGGCTATGGCAAAGATAACTGC
CAAACTAACCAAGTTCACGTTTTTGATACTGTTAATCAGACGTGGAGCCA
GCCGGTGATAAAGGGCAGCCCGCCCGCTCCGCGGGACAGCCACAGTTGTA
CGACTGTTGGGGAAAATCTCTATGTTTTTGGTGGTACAGATGGAATGAAT
CCTCTTAGAGATCTGCATATATTAGACACTTCTTCACACACATGGATATC
TCCAAGTGTAAGAGGTGAAGGGCCGGAGGCACGGGAGGGTCATAGTGCGG
CCCTCGTTGGTAAACGACTCTTCATATTTGGTGGTTGCGGAAAATCCTCT
AATACAAATGATGAAGTATATTACAGTGATCTTTACATATTGAATACAGA
AACCTTTGTGTGGAAACGTGCTACAACATCTGGCAATCCTCCATCTGCAC
GTGATAGTCATACGTGCTCATCTTGGAAGAATAAGATCATTGTGATTGGT
GGTGAAGATGGACATGATTATTATTTGTCTGATGTCCATATCCTTGATAC
AGACACACTTACTTGGAAAGAGTTGAACACTTCTGGCATGGTGTTGTCAC
CTCGAGCTGGTCATTCCCACTGTGCATTT
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