FC877875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 1.776e-124 Identity = 200/276 (72.46%), Postives = 238/276 (86.23%), Query Frame = 1 Query: 112 DPELVVEEVHKSINAS------RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 DP++V +EV K + S RR LGF SCGTGNPIDDCWRCD W +NR++LADC IGFG+ AIGG+DG+ Y+VTD D+D VNPKPGTLR+AVIQ+EPLWI+F RDMVI LK+ELIMNSFKTID RG++VHIA G CITIQ++TN+IIHG++IHDCK GNA VR SPSH+GWRT++DGD VSIFG SH+W+DH SLS+C DGL+DA+ GSTAIT+SNN+ THHN+VMLLGHSD++T+DK MQVTIA+NHFGEGLVQRMPRCRHGYFHVVNND Sbjct: 88 DPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNND 363
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 437.573 bits (1124), Expect = 4.837e-122 Identity = 194/272 (71.32%), Postives = 234/272 (86.03%), Query Frame = 1 Query: 106 VQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 V D L + E+ + RR LG+ +CGTGNPIDDCWRCDP W +NR++LADC IGFG+ AIGG+DG+ YVVTD DD+PVNP+PGTLR+AVIQD PLWI+F RDMVI LK+ELI+NSFKTIDGRGA+VHIA G CITIQ+VTN+I+HG++IHDCK GNA VR S +H+GWRT++DGD +SIFG SHVW+DH SLS+C DGL+DA+ GSTAITISNN++THHN+VMLLGHSD++ +DK MQVTIA+NHFG GL+QRMPRCRHGYFHVVNND Sbjct: 51 VADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNND 322
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 419.083 bits (1076), Expect = 1.780e-116 Identity = 191/283 (67.49%), Postives = 228/283 (80.57%), Query Frame = 1 Query: 91 ISSSPVQDPELVVEEVHKSINAS------RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 ++ V DP+ V EV I+ S RR LGF SCG GN IDDCWRCD W +NR+ LADC +GFG +A GG++G YVVTD DDD VNPKPGTLR+AVIQ EPLWIIF RDMVI LK+ELIMNSFKTID RGA+VHIA G CITIQ +TN+I+HG++IHDCKR GN VR SPS G+R +DGD ++IFG SH+W+DH SLSNC DGL+D ++GSTAITISNN+ THH++VMLLGH+D++T+DK MQVT+A+NHFGEGL+QRMPRCRHGYFHVVNND Sbjct: 63 LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNND 345
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 408.683 bits (1049), Expect = 2.406e-113 Identity = 190/282 (67.38%), Postives = 219/282 (77.66%), Query Frame = 1 Query: 103 PVQDPELVVEEVHKSINAS--RRNL-------GFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 P DPELV +V +NAS RR G C TGNPIDDCW+CDP W NRQ LADC IGFG+ A+GGK G+ Y VTDS DDD VNPKPGTLRY VIQ+EPLWI+F +M+I LK+ELI NS+KT+DGRGA+VHI GG CIT+QYV+NIIIH I+IH C + GN NVR SP+HYG+RT SDGDG+SIFG +W+DHCSLS C DGLIDA+ GST ITISNN+ +HHN+VMLLGHSD + D MQVTIAFNHFGE L+QRMPRCR GY HVVNND Sbjct: 34 PHPDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRCRRGYIHVVNND 315
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.674e-98 Identity = 166/260 (63.85%), Postives = 201/260 (77.31%), Query Frame = 1 Query: 145 SINASRRNLGFLSCGTGNPIDDCWRC-DPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 S ++S + SC TGNPIDDCWRC D W NRQ+LADC+IGFG +GGK+GKIYVVTDS D++P NP PGTLRY VIQ+EPLWI+F+ +M+I LK+ELI+NS+KT+DGRG++VHI G C+T+QYV +IIIH ++I+DCK R SDGDG+SIFG +WVDHCS+S+C DGLIDA+ GSTAITISNNY THH++VMLLGH D + D MQVTIAFNHFG+GLVQRMPRCR GY HVVNND Sbjct: 62 SSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGR---------SDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNND 312
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 1.085e-97 Identity = 164/241 (68.05%), Postives = 192/241 (79.67%), Query Frame = 1 Query: 196 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 918 NPID CWR +P W NR+ LADCA+GFGK A+GGK G IYVVT+ DD P NP+PGTLRYAVIQ +PLWI FARDMVI L+ ELIMNS+KTIDGRGA V IA GPCITIQ+V+++IIHGI+IHDCK G + VR SP+H G R SDGD ++IF SH+W+DHC S C DGLID +H STA+TISNNY T H+KVMLLGH+D +DK M+VTIAFNHFG GL++RMPR R GY HV NN Sbjct: 37 NPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDD-PENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANN 276
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.622e-93 Identity = 158/241 (65.56%), Postives = 188/241 (78.01%), Query Frame = 1 Query: 196 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 918 NP+D CWR W+ NR+ LADCA+GFG +GGK G IYVVT+ D+ NP PG+LRY VIQ +PLWI FA+DMVITL EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HGI+IHDCK G + VR SP+H G R SDGD ++IFG S+VW+DHC L++C DGLID IH STAITISNNY T H+KVMLLGH+D F +D M+VT+AFNHFG GLV+RMPR R GY HV NN Sbjct: 47 NPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQ-NPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANN 286
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 2.341e-92 Identity = 161/261 (61.69%), Postives = 196/261 (75.10%), Query Frame = 1 Query: 151 NASRRNLGFLS----CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 N++RR LG C NPID CWRCDP W +NR++LADCA+GFG +AIGGKDG+ YVVTD+ DD +PKPGTLR+AVIQ EPLWIIF R M I L +E+IM S KTID RG +VHI G IT+QY+ N+IIHG++IHD G VRD+ H G RT SDGDG+SIFG S++W+DH S+ C DGLIDA+ GST ITISN + T HN+VML G SD+ + D+ MQ+T+AFNHFG+ L+QRMPRCR GY HVVNND Sbjct: 81 NSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTDNSDDYN-DPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRTKSDGDGISIFGASYIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGASDSSSIDQVMQITLAFNHFGKRLIQRMPRCRWGYIHVVNND 340
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 3.058e-92 Identity = 166/278 (59.71%), Postives = 202/278 (72.66%), Query Frame = 1 Query: 115 PELVVEEVHKSI------NASRRNLG---FLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 PE V +K++ N++RRNL C NPID CWRC W NR+ L C GFG++ GG G+IYVVTD DD +PK GTLR+ VIQD PLWIIF + MVI LK+ELI+N+ KTIDGRGA+V IAGG +T+Q+V N+IIHGI+IHD K G +RDS H G RT SDGDG+SI G S++W+DH SL+ C+DGLID I GSTAITISN ++T H+ VMLLG SDT+TQD+ MQVT+AFNHFG GLVQRMPRCR+G+ HVVNND Sbjct: 50 PEEVTNHFNKAVHSSFEGNSTRRNLRTNKLGQCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLIDVILGSTAITISNCHLTEHDDVMLLGASDTYTQDEIMQVTVAFNHFGRGLVQRMPRCRYGFVHVVNND 327
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 3.058e-92 Identity = 159/250 (63.60%), Postives = 197/250 (78.80%), Query Frame = 1 Query: 181 SCGT-GNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDC---KRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 918 SC GNPID+CWRCD W++NR+ LADCA+GFG+ +IGG+ G+ Y VTDSGDD+P+NP PGTLRYA QD+PLWIIF RDMVI LK++L + S+KTIDGRG +V IA GPC+T+ V+NIII+ + IHDC KR N S Y SDGDG+SIF +W+DHC+L C DGLIDA++GST ITISN+YM +HN+VMLLGHSD ++ D++M+VTIAFN+FGEGLVQRMPRCRHGYFH+VNN Sbjct: 43 SCSANGNPIDECWRCDENWKDNRKNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKR----NALSSLGGY-----SDGDGISIFESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNN 283 The following BLAST results are available for this feature:
BLAST of FC877875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877875 ID=FC877875; Name=FC877875; organism=Citrus clementina; type=EST; length=922bpback to top |