FC877875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 3.994e-92 Identity = 155/241 (64.32%), Postives = 186/241 (77.18%), Query Frame = 1 Query: 196 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 918 NP+D CWR W NR+ LADC +GFG +GGK G +YVVT+ D+ NP+PG+LRY VIQ +PLWI FA+DMVITL+ EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HGI+IHDCK G VR SP+H G R SDGD ++IFG S++W+DHC L++C DGLID IH ST ITISNNY T H+KVMLLGH+D F QD M+VT+AFNHFG GLV+RMPR R GY HV NN Sbjct: 47 NPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQ-NPQPGSLRYGVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANN 286
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.398e-89 Identity = 159/285 (55.79%), Postives = 203/285 (71.23%), Query Frame = 1 Query: 97 SSPVQDPELVVEEVHKSINASRRNL-----GFLS-----CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 + P ++ + +E + S N++RR+L G S C NPID CWRC W + R++L C GFG + GGK G+IYVVT + D+D VNPKPGTLR+AVIQ EPLWIIF DM I L +EL++NS KTID RGA+VH+A G IT+Q+V N+IIHG++IH +RDS H+G RT +DGDG+SI+G S++W+DH S+S C DGLIDAI GST ITISN++ THHN VMLLG +T DK+MQVT+A+NHFG+GLVQRMPR R G+ HVVNND Sbjct: 79 AKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPIDKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNND 363
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 7.795e-88 Identity = 158/284 (55.63%), Postives = 197/284 (69.37%), Query Frame = 1 Query: 112 DPELVVEEVHKSINASRRNLGFLSCGTG--------------NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 + E V+E + N++RR+L G G NPID CWRC P W R++L C GFG + GGK G+IYVVT DDD VNP+PGTLR+AVIQ EPLWI+F DM I L +EL++ S KTID RGA+VHIA G IT+QYV NIIIHG+++H + +RDS +H+G R +DGDG+SIFG +++W+DH S+S C DGLIDAI GSTAITISN++ THHN VMLLG + DK MQVT+A+NHFG+GLVQRMPR R G+ HVVNND Sbjct: 83 EEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGPCTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPGTLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFVHVVNND 366
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 4.277e-86 Identity = 144/246 (58.54%), Postives = 185/246 (75.20%), Query Frame = 1 Query: 184 CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 C NPID+CWRCD W NR++LADC +GFG++ GGKDG IYVV D+ D+D +NPKPGTLR+AV +D PLWIIFAR M+I L++EL++ S KTIDGRGA V+I G +T+Q+V N+IIH I + G +RDS +H G RT SDGDG+S+FG +++W+DH S++ C DG+IDAI GSTA+TISN++ T H +VML G D DK MQ+T+AFNHFG+ L QRMPRCR+G HVVNND Sbjct: 101 CLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGARDEHVIDKKMQITVAFNHFGKRLEQRMPRCRYGTIHVVNND 346
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 4.729e-85 Identity = 149/241 (61.83%), Postives = 178/241 (73.86%), Query Frame = 1 Query: 196 NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 918 NPID CWR +PKW NRQ LA CA+G+GK AIGGK+G IYVVT+ D+ P P PGTLRYAV Q +PLWI FARDMVI LK +L++NS+KTIDGRGA V IA GPC+ I+ V ++IIHGI+IHDCK N DGDG+ +F +HVW+DHC LS C+DGLID I STA+TISNNY T H+KVMLLGH D++ DK+M+VTIAFN FG GL++RMPR R GY HV NN Sbjct: 36 NPIDACWRRNPKWATNRQALAHCAVGYGKAAIGGKNGPIYVVTNPSDN-PTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG--------------MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANN 261
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.053e-84 Identity = 146/265 (55.09%), Postives = 197/265 (74.34%), Query Frame = 1 Query: 127 VEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 + +V + +RR F S N ID CWR D W++NR++LADC +GFG++ GGK+G IYVVTD D+D + PKPGT+R+AV +D PLWIIFAR M+I L++ELI+ + KTIDGRGA ++I GG +T+Q+V N+IIH I+I KRG + DS H+G RT+SDGDG++IFG ++VW+DH S+++C+DG+IDAI GSTAITISN++ T H++VML G ++ DK MQ+T+AFNHFG+ L QRMPR R G HVVNND Sbjct: 81 LRQVGRGKKTTRRGGRFESL---NAIDKCWRGDKNWDKNRKKLADCVLGFGRKTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDKKMQITVAFNHFGKRLKQRMPRVRFGLVHVVNND 342
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.747e-82 Identity = 144/246 (58.54%), Postives = 176/246 (71.54%), Query Frame = 1 Query: 184 CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 C N ID CWRCDP W ENRQ++ADCA+GFG AIGGK G+IYVVTD+ DDD V+PKPGTLRY VIQ EPLWIIF ++M I L ELI+ S KTIDGRG +VHI G I IQ +NIII + IH+ +R+S H G R +GDG+SIF +W+DH S+S DGLIDA+ ST ITISN + T H KVML G +D + DK+M++T+A+NHFG+ L QRMPRCR G+FH+VNND Sbjct: 42 CRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNND 287
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 293.508 bits (750), Expect = 1.128e-78 Identity = 144/262 (54.96%), Postives = 179/262 (68.32%), Query Frame = 1 Query: 145 SINASRRNLGFL---SCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 +INA RR L C N ID CWRCDP W E+RQ++ADCA+GFG A+GGK G Y+VTD+ DDD V+PKPGTLR+ VIQ PLWI FAR M I L ELI++S KTIDGRG VHIA G I IQ +N+II + IH+ +R+S H G R +GD +SIF +W+DH S+S DGLIDA+ GST ITISN + T H KVML G +D +D+ M++T+A+NHFG+ L QRMPRCR G+FH+VNND Sbjct: 27 AINAPRRKLTKKYRGPCMAVNSIDKCWRCDPFWAEDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIRLTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNHFGKRLDQRMPRCRFGFFHLVNND 288
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.336e-71 Identity = 132/255 (51.76%), Postives = 175/255 (68.63%), Query Frame = 1 Query: 178 LSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRG--GNANVRDS----PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 +SC + NPID CWR D W +NR +LADCA+GFG +GGK G Y VT S DD+PVNP PGTLRY +++ LWIIF+++M I LK L + KTIDGRGA VH+ GGPC+ ++ V+++I+HG++IH C G+ V +S P H DGD +++ ++ W+DH SLS+C+DGLID GST ITISNN+ +H+KVMLLGH DT+ DK+M+VT+AFN FG QRMPR R+G HV NN+ Sbjct: 17 VSCCSDNPIDSCWRGDSNWGQNRMKLADCAVGFGSSTMGGKGGDFYTVT-SADDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNN 265
BLAST of FC877875 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.336e-71 Identity = 131/255 (51.37%), Postives = 173/255 (67.84%), Query Frame = 1 Query: 178 LSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIA-GGPCITIQYVTNIIIHGINIHDCKRGGNANVRDS------PSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 921 +SC + NPID CWR D W++NR +LADCA+GFG A+GGK G Y VT S DDDPVNP PGTLRY ++ LWIIF++++ I L L + KTIDGRGA VHI GGPC+ ++ V+++I+HG+NIH C + NV S P H DGD +++ + VW+DH SLS+ +DGL+D ST +TISNN+ +H+KVMLLGHSD ++ DK+M+VT+AFN FG QRMPR R+G HV NN+ Sbjct: 17 VSCFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVTSS-DDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVH-----AQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGVTISNNHFFNHHKVMLLGHSDIYSDDKSMKVTVAFNQFGPNAGQRMPRARYGLIHVANNN 265 The following BLAST results are available for this feature:
BLAST of FC877875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877875 ID=FC877875; Name=FC877875; organism=Citrus clementina; type=EST; length=922bpback to top |