FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CHLSY (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pdxS PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.516e-58 Identity = 110/197 (55.84%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+ ++K+AV++PVM++ R+GHFVEAQ+LE+IG+DYIDESEVL ADE + INKH FR PFVCGCRNLGEALRR+ EGAAM+R +G+ +GN+VE V++ R++ +IR L +M+EDE+F +AK+I APY+LV Q Sbjct: 2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQ 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAA (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pdxS PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.516e-58 Identity = 110/197 (55.84%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+ ++K+AV++PVM++ R+GHFVEAQ+LE+IG+DYIDESEVL ADE + INKH FR PFVCGCRNLGEALRR+ EGAAM+R +G+ +GN+VE V++ R++ +IR L +M+EDE+F +AK+I APY+LV Q Sbjct: 2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQ 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_ROSCS (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pdxS PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.623e-57 Identity = 109/199 (54.77%), Postives = 150/199 (75.38%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+ ++K AV++PVM++ R+GHFVEAQ+LE++G+DYIDESEVL ADE + INKH FR PFVCGCRNLGE LRR+ EGAAM+R +G+ +GN+VE V++ R++ +IR L MDEDE+F +AK I APY+LV Q + Sbjct: 3 KSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKEAVTIPVMAKARIGHFVEAQVLEALGIDYIDESEVLTPADEEHHINKHKFRIPFVCGCRNLGEGLRRVAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQTMDEDELFTYAKNIQAPYELVRQVAE 200
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.616e-57 Identity = 112/199 (56.28%), Postives = 150/199 (75.38%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 K +KAGLAQML+GG I++V + EQA+IAEAAGAC++M E ++ G+ RM DPS++K ++ AVS+PVM++VR+GHFVEAQILESIG+DYIDESEVL AD+ N I K F PFVCG RNLGEALRRI EGAAMIR +G+ +G++VE V++ R + G++R + +M DE++ +AK+IAAP DLV + Q Sbjct: 6 KGSTQVKAGLAQMLKGGVIMDVVNAEQARIAEAAGACAVMALERVPADIRAQGGVARMSDPSMIKEIQAAVSIPVMAKVRIGHFVEAQILESIGVDYIDESEVLTPADDINHIEKSKFTVPFVCGSRNLGEALRRISEGAAMIRTKGE-AGTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAPIDLVKECAQ 203
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSC (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain CBDB1) GN=pdxS PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.519e-55 Identity = 110/193 (56.99%), Postives = 151/193 (78.24%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 F +K+GLAQML+GG I++V++ EQAKIAE AGAC++M E PS G+ RM DP++++ + + VS+PVM++ R+GHFVEAQILES+G+DYIDESEVL ADE + KH+F+ PFVCGCR+LGEALRRI EGAAMIR +G+ +GNIVE V+++RS+MG +R + +M DE+ A+AK+I AP +LV + Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGE-AGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLE 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSB (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain BAV1) GN=pdxS PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.519e-55 Identity = 110/193 (56.99%), Postives = 151/193 (78.24%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 F +K+GLAQML+GG I++V++ EQAKIAE AGAC++M E PS G+ RM DP++++ + + VS+PVM++ R+GHFVEAQILES+G+DYIDESEVL ADE + KH+F+ PFVCGCR+LGEALRRI EGAAMIR +G+ +GNIVE V+++RS+MG +R + +M DE+ A+AK+I AP +LV + Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGE-AGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLE 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DEHE1 (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides ethenogenes (strain 195) GN=pdxS PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.519e-55 Identity = 110/193 (56.99%), Postives = 151/193 (78.24%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 F +K+GLAQML+GG I++V++ EQAKIAE AGAC++M E PS G+ RM DP++++ + + VS+PVM++ R+GHFVEAQILES+G+DYIDESEVL ADE + KH+F+ PFVCGCR+LGEALRRI EGAAMIR +G+ +GNIVE V+++RS+MG +R + +M DE+ A+AK+I AP +LV + Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEKIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADESFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGE-AGTGNIVEAVRHMRSVMGSVRRVQSMSADELSAYAKEINAPLELVLE 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_DICDI (Probable pyridoxine biosynthesis protein pdx1 OS=Dictyostelium discoideum GN=pdx1 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.773e-55 Identity = 106/198 (53.54%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 265 NPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEPSRP------GIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +PF IK+ LAQML+GG I++V + EQA+IAE AGAC++M E G+ RM DP ++K + AV++PVM++VR+GHFVEAQIL+ IG+DYIDESEVL +AD N I+K F+ PFVCGCRNLGEALRRI EGAAMIR +G+ +G++VE V++ R++ +I+ + NMD E++ +AK+I AP +LV + K+ Sbjct: 14 SPFRIKSSLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALEKIPADIRHFGGVARMSDPGMIKEIMNAVTIPVMAKVRIGHFVEAQILQEIGVDYIDESEVLTIADNENHIDKSEFKVPFVCGCRNLGEALRRISEGAAMIRTKGE-AGTGDVVEAVRHARAVNKEIKKIQNMDPHELYTYAKEIQAPLELVKEVKR 210
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HERA2 (Pyridoxal biosynthesis lyase pdxS OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pdxS PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.336e-54 Identity = 107/193 (55.44%), Postives = 142/193 (73.58%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 F+ K GLAQML+GG I++V + +QAKIAE AGA ++M E G+ RM DP +++ + AV++PVM++ R+GHFVEAQILE+IG+DYIDESEVL ADE + NKHNF+ PFVCG RNLGEALRRI EGAAMIR +G+ +GN+VE V++ R++ +IR L +D DE+F AK + APY+LV Q Sbjct: 6 FTTKVGLAQMLKGGVIMDVVTPDQAKIAEEAGAVAVMALERVPADIRKDGGVARMSDPEMIQGIIEAVTIPVMAKSRIGHFVEAQILEAIGVDYIDESEVLTPADEEHHTNKHNFKVPFVCGARNLGEALRRITEGAAMIRTKGE-AGTGNVVEAVRHARTMFAEIRRLQTLDPDELFVAAKNLQAPYELVKQ 197
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_NATTJ (Pyridoxal biosynthesis lyase pdxS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pdxS PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.217e-53 Identity = 103/200 (51.50%), Postives = 147/200 (73.50%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K ++K G+AQM +GG I++V++ EQAKIAE AGA ++M E + G+ RM DP ++K + AVS+PVM++ R+GHFVEA+ILE++G+DYIDESEVL ADEY I+K+ F PFVCG RNLGEALRR+ EGA+M+R +G+ +GN+VE V+++R++M IR + N+ +DE+ AK I APYDL+ Q K+ Sbjct: 4 EKGTETVKKGMAQMQKGGVIMDVTTPEQAKIAEKAGAVAVMALEKVPADIRAGGGVARMADPEVIKKIMDAVSIPVMAKARIGHFVEARILENLGVDYIDESEVLTPADEYYHIDKNKFTVPFVCGARNLGEALRRVGEGASMMRTKGE-AGTGNVVEAVRHIRTVMDGIRKVQNLPDDELMTEAKNIGAPYDLIKQVKE 202 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |