FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STAA1 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+A+M +GG I++V + EQA+IAE AGA ++M E PS G+ RM +P +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL ADE + K F PFVCGCRNLGEA RRI EGAAM+R +G+ +GNIVE V+++R + ++ L M++DE+ FAK I APY+++ Q K Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLE (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae GN=pdxS PE=3 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 97/191 (50.79%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V EQA+IAE +GA ++M E PS + G+ RM DP +++S+ AV++PVM++ R+GHFVEAQIL+S+G+DYIDESEVL AD + I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ GDIR L ++ EDE++ AK++ APY+LV + Sbjct: 22 VKRGMAEMLKGGVIMDVVIPEQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGE-AGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIE 211
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLB (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae (strain Br4923) GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 97/191 (50.79%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V EQA+IAE +GA ++M E PS + G+ RM DP +++S+ AV++PVM++ R+GHFVEAQIL+S+G+DYIDESEVL AD + I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ GDIR L ++ EDE++ AK++ APY+LV + Sbjct: 22 VKRGMAEMLKGGVIMDVVIPEQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGE-AGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIE 211
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISMO (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 98/193 (50.78%), Postives = 138/193 (71.50%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V +AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + M +DE+ AK APY+L+ + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISIN (Pyridoxal biosynthesis lyase pdxS OS=Listeria innocua GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 99/193 (51.30%), Postives = 138/193 (71.50%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + +M +DE+ AK APY+LV + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIASMTDDELMVAAKNFGAPYELVKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BIFLD (Pyridoxal biosynthesis lyase pdxS OS=Bifidobacterium longum (strain DJO10A) GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 95/193 (49.22%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDL 822 +N + LAQML+GG I++V++ EQAKIA+ AGAC++M E + G+ RM DP+++K ++ AVS+PVM++VR+GH EA+IL++I +DYIDESEVL AD+ I+K+ F PFVCG +NLGEALRRI EGAAMIR +G+ +G++++ V+++R++ IR L + +DEV+ AK++A PYDL Sbjct: 3 QNRAELNRNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIDIDYIDESEVLSPADDVYHIDKNQFDVPFVCGAKNLGEALRRIAEGAAMIRTKGE-PGTGDVIQAVRHMRTMNKQIRELVALRDDEVYEAAKQLAVPYDL 194
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BACLD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pdxS PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 95/193 (49.22%), Postives = 138/193 (71.50%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+A+M +GG I++V + EQAKIAE AGA ++M E + G+ RM DP++V+ V AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL ADE +NK+ F PFVCGCR+LGEA RRI EGA+M+R +G+ +GNIVE V+++R + +R + M +DE+ AK + APY+L+ + K Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEALGVDYIDESEVLTPADEEFHLNKNEFTVPFVCGCRDLGEATRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQVRKVVGMSDDELMTEAKNLGAPYELLKEIK 200
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_CERNC (Pyridoxine biosynthesis protein PDX1 OS=Cercospora nicotianae GN=PDX1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.989e-47 Identity = 94/199 (47.24%), Postives = 142/199 (71.36%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 ++ F++K GLAQML+GG I++V + EQA+IAE AGAC++M E G+ RM DP ++K + AV++PVM++ R+GHFVE QIL++IG+DYIDESEVL AD N I+K + PFVCGC+NLGEALRRI EGAAMIR +G+ +G++VE V++++++ +I ++ + ++ A+++ Y+L+ QT Q Sbjct: 53 QSSFAVKVGLAQMLKGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRKDGGVARMSDPQMIKDIMNAVTIPVMAKSRIGHFVECQILQAIGVDYIDESEVLTPADPVNHIDKSVYNVPFVCGCKNLGEALRRISEGAAMIRTKGE-AGTGDVVEAVRHMQTVNAEIAKASSASDADLRMMARELQCDYNLLKQTAQ 250
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METTH (Pyridoxal biosynthesis lyase pdxS OS=Methanobacterium thermoautotrophicum GN=pdxS PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.597e-47 Identity = 99/192 (51.56%), Postives = 139/192 (72.40%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 +K G A+M +GG I++V + EQA IAE +GA ++M E + G+ RM DP+ V+ + AVS+PVM++VR+GHFVEAQ+LE++G+D IDESEVL ADE I+K F PFVCG RNLGEALRRI EGAAMIR +G+ +GNIVE V+++R +M +IR + N +E+E++ ++KI AP +LV +T Sbjct: 8 LKKGFAKMTKGGVIMDVVNAEQAAIAEDSGAVAVMALEKVPADIRASGGVARMADPNKVQEIMDAVSIPVMAKVRIGHFVEAQVLEALGVDMIDESEVLTPADERFHIDKKKFTVPFVCGARNLGEALRRIDEGAAMIRTKGE-PGTGNIVEAVRHMRIMMSEIREIQNKEEEELWEVSRKIEAPLELVRET 198
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBM (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pdxS PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.597e-47 Identity = 98/191 (51.31%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 + + LAQML+ G I++V + EQAKIAE AGA ++M E PS + G+ R DP ++K + AVS+PVM++VR+GHFVEAQILE+IG+DYIDESEVL AD+ INK +F+ PFVCG RNLGEALRRI EGA+MIR +G+ +GN+VE V+++R++ ++R L ++E+ AK++ AP++L+ Sbjct: 5 YELNKNLAQMLKDGVIMDVVNPEQAKIAEEAGAVAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKVRIGHFVEAQILEAIGVDYIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGE-AGTGNVVEAVRHMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLI 194 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |