FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_TROWT (Pyridoxal biosynthesis lyase pdxS OS=Tropheryma whipplei (strain Twist) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 98/193 (50.78%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 ++K GLAQML+GG I++V + +QAKIAE AGA ++M E + G+ RM DP L++ V +VS+PVM++VR+GHF EAQIL+S+ +DYIDESEVL +AD I+K F PFVCG NLGEALRRI EGA+MIR +G+ +G+I + K++R+++ +I L EDE+ A A+K+ AP DLV +T Sbjct: 5 NLKVGLAQMLKGGVIMDVVTPDQAKIAEDAGAVAVMALEKIPSDIRASGGVSRMSDPGLIERVMDSVSIPVMAKVRIGHFAEAQILQSLKVDYIDESEVLSVADSSYHIDKRKFTVPFVCGATNLGEALRRISEGASMIRSKGE-AGTGDIAQATKHIRAILSEISALTQAREDELPARARKLGAPIDLVRET 196
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCPA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium paratuberculosis GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 95/191 (49.74%), Postives = 139/191 (72.77%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQAKIAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++ R+GHFVEAQIL+S+G+DYIDESEVL AD + I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L ++ EDE++ AK++ APY+LV + Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQAKIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIISAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPYELVVE 207
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCA1 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium avium (strain 104) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 95/191 (49.74%), Postives = 139/191 (72.77%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQAKIAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++ R+GHFVEAQIL+S+G+DYIDESEVL AD + I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L ++ EDE++ AK++ APY+LV + Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQAKIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIISAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPYELVVE 207
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISMH (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 98/193 (50.78%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + M +DE+ AK APY+L+ + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISMF (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 98/193 (50.78%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + M +DE+ AK APY+L+ + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISMC (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 98/193 (50.78%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + M +DE+ AK APY+L+ + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIN (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae GN=pdxS PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 96/194 (49.48%), Postives = 140/194 (72.16%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADNRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIG (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittGG) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 96/194 (49.48%), Postives = 140/194 (72.16%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADNRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIE (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittEE) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 96/194 (49.48%), Postives = 140/194 (72.16%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADNRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HAEI8 (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain 86-028NP) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 96/194 (49.48%), Postives = 140/194 (72.16%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADNRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELV 195 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |