FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BACA2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyloliquefaciens (strain FZB42) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.392e-47 Identity = 95/194 (48.97%), Postives = 139/194 (71.65%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAE AGA ++M E + G+ RM DP++V+ V AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL ADE +NK+ + PFVCGCR+LGEA RRI EGA+M+R +G+ +GNIVE V+++R + +R + M +DE+ AK + APY+L+ Q K+ Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQVRKVVAMSDDELMTEAKNLGAPYELLLQIKR 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRAW (Pyridoxal biosynthesis lyase pdxS OS=Streptomyces avermitilis GN=pdxS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.431e-47 Identity = 96/194 (49.48%), Postives = 137/194 (70.62%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+ L+GG I++V + EQAKIAE AGA ++M E G+ RM DP +++ + AVS+PVM++ R+GHFVEAQ+L+S+G+DYIDESEVL ADE N +K F PFVCG NLGEALRRI EGAAMIR +G+ +GN+VE V+++R + +I L D +E++A AK++ APY++V + + Sbjct: 19 VKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRKDGGVARMSDPDMIEGIISAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLTPADEVNHSDKWAFTTPFVCGATNLGEALRRIAEGAAMIRSKGE-AGTGNVVEAVRHLRQIKNEIARLRGYDNNELYAAAKELRAPYEIVKEVAE 211
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_LISW6 (Pyridoxal biosynthesis lyase pdxS OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.431e-47 Identity = 99/193 (51.30%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 +K G+AQM +GG I++V + EQAKIAE AGA ++M E PS G+ RM DP +V+ V AVS+PVM++ R+GH EA++LE++G+DYIDESEVL AD+ + K +F PFVCGCR++GEALRRI EGAAM+R +G+ +GNIVE V+++R + G IR + M +DE+ AK APY+LV + K Sbjct: 10 VKRGMAQMQKGGVIMDVVNAEQAKIAEDAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIVGMTDDELMVAAKNFGAPYELVKEIK 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_GEOSW (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus sp. (strain WCH70) GN=pdxS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.431e-47 Identity = 95/194 (48.97%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAEAAGA ++M E + G+ RM DP++++ V +AVS+PVM++ R+GH+VEA++LE++G+DYIDESEVL ADE I+K F PFVCGCR+LGEA RRI EGA+M+R +G+ +GNIVE V+++R + IR + +M EDE+ AK + AP +++ + K+ Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEASRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQIRKVVSMSEDELVTEAKNLGAPVEVLREIKR 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BACCI (Pyridoxal biosynthesis lyase pdxS OS=Bacillus circulans GN=pdxS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.431e-47 Identity = 95/189 (50.26%), Postives = 140/189 (74.07%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +K G+A+M +GG I++V + EQAK+AEAAGA ++M E PS G+ RM DP++++ V + VS+PVM++ R+GH VEA++LE++G DYIDESEVL ADE I+K +F PFVCG +++GEALRRI EGA+M+R +G+ +GNIVE V+++R + IR + ++ +DE++A AK + APYDLV Sbjct: 8 VKRGMAEMQKGGVIMDVMNAEQAKVAEAAGASAVMALERVPSDIRAAGGVARMADPTVLEEVMKVVSIPVMAKARIGHIVEARVLEALGADYIDESEVLTPADEVFHIDKKDFTVPFVCGAKDIGEALRRINEGASMLRTKGE-PGTGNIVEAVRHMRLIQSQIRKIQSLAKDELYAEAKNLGAPYDLV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BIFAA (Pyridoxal biosynthesis lyase pdxS OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=pdxS PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.787e-47 Identity = 93/192 (48.44%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 265 NPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDL 822 N + LAQML+GG I++V++ EQAKIA+ AGAC++M E + G+ RM DP+++K ++ AVS+PVM++VR+GH EA+IL++I +DYIDESEVL AD+ I+K+ F PFVCG +NLGEALRR+ EGA+MIR +G+ +G++++ V+++R++ IR L ++ +DEV+ AK++A PYDL Sbjct: 4 NRNELNKNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKNRFDVPFVCGAKNLGEALRRVAEGASMIRTKGE-PGTGDVIQAVRHMRTMNKQIRELVSLRDDEVYEAAKQLAVPYDL 194
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_TROW8 (Pyridoxal biosynthesis lyase pdxS OS=Tropheryma whipplei (strain TW08/27) GN=pdxS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.870e-47 Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 ++K GLAQML+GG I++V + +QAKIAE AGA ++M E + G+ RM DP L++ V +VS+PVM++VR+GHF EAQIL+S+ +DYIDESEVL +AD I+K F PFVCG NLGEALRRI EGA+MIR +G+ +G+I + K++R+++ +I L EDE+ A A+++ AP DLV +T Sbjct: 5 NLKVGLAQMLKGGVIMDVVTPDQAKIAEDAGAVAVMALEKIPSDIRASGGVSRMSDPGLIERVMDSVSIPVMAKVRIGHFAEAQILQSLKVDYIDESEVLSVADSSYHIDKRKFTVPFVCGATNLGEALRRISEGASMIRSKGE-AGTGDIAQATKHIRAILSEISALTQAREDELPARARELGAPIDLVRET 196
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BIFA0 (Pyridoxal biosynthesis lyase pdxS OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=pdxS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.870e-47 Identity = 92/188 (48.94%), Postives = 139/188 (73.94%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDL 822 + LAQML+GG I++V++ EQA+IAE AGAC++M E + G+ RM DP+++K ++ AVS+PVM++VR+GH EA+IL++I +DYIDESEVL AD+ I+K F PFVCG +NLGEALRRI EGA+MIR +G+ +G++++ V+++R++ IR L ++ +DEV+ AK++A PY+L Sbjct: 8 LNRNLAQMLKGGVIMDVTTPEQARIAEDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKREFDVPFVCGAKNLGEALRRIEEGASMIRTKGE-PGTGDVIQAVRHMRTMTKQIRELASLRDDEVYEAAKQLAVPYEL 194
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_SALTO (Pyridoxal biosynthesis lyase pdxS OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=pdxS PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.289e-46 Identity = 97/191 (50.79%), Postives = 137/191 (71.73%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQAKIAE AGA ++M E PS + G+ RM DP ++ S+ AVS+PVM++VR+GHFVEAQIL+S+G+DY+DESEVL AD N ++K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R + +IR L ++ DE++ AK + APY+LV + Sbjct: 21 VKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPSDIRAQGGVSRMSDPDMIDSIMDAVSIPVMAKVRIGHFVEAQILQSLGVDYVDESEVLTPADYANHVDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSNATTHMRGIRTEIRRLQSLPTDELYLAAKDLQAPYELVKE 210
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METKA (Pyridoxal biosynthesis lyase pdxS OS=Methanopyrus kandleri GN=pdxS PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.289e-46 Identity = 95/197 (48.22%), Postives = 139/197 (70.56%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 K + +K G A+ML+GG +++V++VEQA+IAE AGA ++MV E + G+ RM DP+ ++ + V++PVM++ R+GH EAQ+LE+IG+D IDESEVL ADE + INK F PFVCG RNLGEALRRI EGAAMIR +G+ +GN+ E V+++R + +I L +D++E++ AK+ P+DLVA+ Sbjct: 2 KTGTWRVKTGFARMLKGGVVMDVTNVEQAQIAEDAGAVAVMVLEKVPADIRAAGGVARMCDPAKIEEIMDHVTIPVMAKCRIGHVAEAQVLEAIGVDMIDESEVLTPADEEHHINKWEFEVPFVCGARNLGEALRRIAEGAAMIRTKGE-AGTGNVAEAVRHMRIIRREISELTRLDKEELYGKAKEYGVPFDLVAE 197 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |