FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEGJ (Pyridoxal biosynthesis lyase pdxS OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pdxS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.605e-42 Identity = 88/192 (45.83%), Postives = 131/192 (68.23%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 KK +K G A+M++GG I++V++ EQA+IAE AGA ++M G+ RM ++ + AV++PVM++VR+GH EA+ILE++G+D IDESEVL +D Y I+K F+ PFVCG RNLGEA+RRI EGAAM+R +G+ +GNI+E V++VR L +I +L M +++++ A+K A PY Sbjct: 9 KKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHRVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEARILEALGVDMIDESEVLTPSDPYFHIDKREFKIPFVCGNRNLGEAVRRIWEGAAMMRTKGE-AGTGNIIEAVRHVRLLKDNIALLQRMTDEQIYGVAEKFAEPY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METMP (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis GN=pdxS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42 Identity = 94/199 (47.24%), Postives = 140/199 (70.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSL-MGDIRILNNMD---EDEVFAFAK-KIAAPYDLVAQTKQ 840 +K G A+M++ G +++V++VEQA IAE AGA ++M E P+ + G+ RM DP ++ +K AVS+PVM++ R+GH+VEAQ+LESIG+D +DESEVL ADE N I+K F PFVCG RNLGEALRRI EGAAMIR +G+ +GN+VE VK++R++ G R++ + E E+ A+ ++ P +L+++ + Sbjct: 9 LKRGFAKMVKHGVVMDVTNVEQALIAEEAGATAVMALERVPADIRVQGGVARMSDPEMILEIKDAVSIPVMAKARIGHYVEAQVLESIGVDMVDESEVLTPADEVNHIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGE-AGTGNVVEAVKHMRAVNEGIARVIGYKEMGLEAELIQMARNELKVPMELISEVAE 206
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METJA (Pyridoxal biosynthesis lyase pdxS OS=Methanocaldococcus jannaschii GN=pdxS PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.560e-42 Identity = 94/198 (47.47%), Postives = 133/198 (67.17%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 KK +K G A+M++ G +++V++VEQA+IAE AGA ++M E + G+ RM DP+L++ + AVS+PVM++ R+GH EA +LE+IG+D IDESEVL AD + I K F PFVCG RNLGEA+RRI EGAAMIR +G+ +GNIVE V+++R + I L M ++EV+ AK A Y +A+T Sbjct: 2 KKGTDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHMRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKT 198
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRKO (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus kodakaraensis GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.249e-41 Identity = 90/186 (48.39%), Postives = 128/186 (68.82%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 +K G A+M++GG I++V++ EQA+IAE AGA S+M G+ RM ++ + AV++PVM++VR+GH EA+ILE++G+D IDESEVL +D + I+K F PFVCG RNLGEA+RRI EGAAMIR +G+ +GNIVE V++VR + IR + M +D+V+A A+K A PY Sbjct: 15 LKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHRVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEAKILEALGVDMIDESEVLTPSDPFFHIDKREFTVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHVRLVAEGIRQIQAMTDDQVYAVAEKFAEPY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRFU (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus furiosus GN=pdxS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.130e-41 Identity = 88/192 (45.83%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 +K +K G A+M++GG I++V++ EQA+IAE AGA ++M G+ RM ++ + AV++PVM++VR+GH EA+ILE++G+D IDESEVL AD + I K F PFVCG RNLGEA+RRI EGAAMIR +G+ +GNI+E V++VR + +IR++ M ++E++ A+K A PY Sbjct: 9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKVRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIIEAVRHVRLVNENIRLIQRMTDEEIYGVAEKFAEPY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRAB (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus abyssi GN=pdxS PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.093e-41 Identity = 88/192 (45.83%), Postives = 129/192 (67.19%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 +K +K G A+M++GG I++V++ EQA+IAE AGA ++M G+ RM ++ + AV++PVM++ R+GH EA+ILE++G+D IDESEVL AD + I K F PFVCG RNLGEA+RRI EGAAMIR +G+ +GNIVE V++VR + +IR++ M ++E++ A+K A PY Sbjct: 9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTAPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHVRLVNENIRLIQRMTDEEIYGVAEKFAEPY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRHO (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus horikoshii GN=pdxS PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.057e-40 Identity = 87/192 (45.31%), Postives = 129/192 (67.19%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 +K +K G A+M++GG I++V++ EQA+IAE AGA ++M G+ RM ++ + AV++PVM++ R+GH EA+ILE++G+D IDESEVL AD + I K F PFVCG RNLGEA+RRI EGAAMIR +G+ +GNI+E V++VR + +IR++ M ++E++ A+K A PY Sbjct: 9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTAPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIIEAVRHVRLVNENIRLIQRMTDEEIYGVAEKFAEPY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_SULTO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus tokodaii GN=pdxS PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.803e-40 Identity = 85/183 (46.45%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 304 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 +GG +++V++V QA+IAE AGA ++MV + G+ RM DP +++ V ++++PVM++VR+GH+ EA+ILE++G+D IDESEVL ADE + INK F+ PFV G RNLGEALRRI EGA+MIR +G+ +GN+ E VK+++ + G+IR L +M E++ A++ PY +V T Sbjct: 58 KGGVVMDVTNVTQAEIAEDAGATAVMVLDKLPYDVRKSGGVARMADPKIIEEVMNSITIPVMAKVRIGHYYEAKILEALGVDMIDESEVLTPADEEHHINKWEFKVPFVNGARNLGEALRRITEGASMIRTKGE-AGTGNVSEAVKHMKIINGEIRSLISMSEEDRMKKAREYQVPYQIVELT 239
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METS5 (Pyridoxal biosynthesis lyase pdxS OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pdxS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.075e-40 Identity = 86/203 (42.36%), Postives = 135/203 (66.50%), Query Frame = 1 Query: 244 AITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 ++T + +K +GG +++V+SVEQA IAE AGA S+MV + G+ RM DP +++ V ++++PVM++VR+GH+ EA++LE++G+D IDESEVL ADE + INK F+ PFV G RNLGE LRRI EGA+MIR +G+ +GN+ E VK+++ + ++R L +M E++ ++++ PY+LV T Sbjct: 39 SLTGQVQGTTRVKHAFPIFQKGGVVMDVTSVEQAGIAEEAGAVSVMVLDKLPYDVRKAGGVARMADPKIIEEVMNSITIPVMAKVRIGHYYEAKVLEALGVDMIDESEVLTPADEEHHINKWEFKIPFVNGARNLGEGLRRISEGASMIRTKGE-PGTGNVSEAVKHIKIVNQELRALLSMAEEDRVKKSRELQVPYELVELT 240
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_AERPE (Pyridoxal biosynthesis lyase pdxS OS=Aeropyrum pernix GN=pdxS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.075e-40 Identity = 91/220 (41.36%), Postives = 138/220 (62.73%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAKKNPFS----IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 + E+G YG + +A + P + +K G +GG +++V++VEQA IAE AGA ++MV + G+ RM D +++ V ++++PVM++VR+GH+ EA ILESIG+D IDESEVL DE + INK F+ PFV G R+L EALRRI EGA+MIR +G+ +GN+ E V++++ +MGDI L + +E A++ P+ LV T Sbjct: 20 LREEGVWLAYGPEKLPEALEKPVNGTVAVKLGFPIYQKGGVVMDVTNVEQAGIAEDAGAVAVMVLDKLPYDVRKAGGVARMADVKVIEQVMSSITIPVMAKVRIGHYYEAMILESIGVDMIDESEVLTPVDEKHHINKWLFKVPFVNGARSLAEALRRIAEGASMIRTKGE-AGTGNVAEAVRHMKLIMGDIWRLRGLSAEERLRVAREYGVPHQLVDLT 238 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |