FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEVO (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma volcanium GN=pdxS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.157e-37 Identity = 82/186 (44.09%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPY 816 IK G + M +GG I++V++ EQAKIAE AGA ++M E + G+ RM DP ++ + AV++PVM++VR+GH EA LE +G+D +DESEVL AD + + K P V G RNL EA+RRI EGAAM+R +G+ +GNI+E V+++R + +I I+ M +DE+ A+ IA+ Y Sbjct: 15 IKRGFSSMTKGGVIMDVTTAEQAKIAEKAGAVAVMALERVPADIRAAGGVARMADPKKIREILDAVTIPVMAKVRIGHISEAYTLEKLGVDMLDESEVLTPADPFFHLYKKKLTVPVVSGARNLPEAVRRIFEGAAMVRTKGE-AGTGNIIEAVRHIRKVNEEIAIVRRMTQDEIKTAAENIASSY 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRAR (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=pdxS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.157e-37 Identity = 87/192 (45.31%), Postives = 125/192 (65.10%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 +KAG MLR G I++V++VEQA+IAE AGA +MV + G+ RM D +++ V V++PV ++VR+GH+ EA +L+ IG+D IDESEVL D+ + INK F PFV GCR L EALRRI EGA+MIR +G+ +GN+ E VK+ ++L I L +E+ + +A++ AP +LVA T Sbjct: 50 VKAGFPAMLRNGVIMDVTNVEQAQIAEEAGAVGVMVLDKLPYDVRKAGGVARMADLKVIEEVMSHVTIPVSAKVRIGHYYEAFLLQEIGVDLIDESEVLTPVDDQHHINKWLFTVPFVNGCRELCEALRRISEGASMIRSKGE-AGTGNVSEAVKHFKALYRAINELAAAEEERLRDYARQCQAPLELVALT 240
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_STELP (Probable pyridoxal biosynthesis protein PDX1 (Fragment) OS=Stellaria longipes PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37 Identity = 82/142 (57.75%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 430 LVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCR-NLGEALRRIREGAA----MIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 L+K +K AV++PVM++ R+GHFVEAQILESIG+DY+DESEVL ADE + INKHNF+ PFVCG G R G A R++ ++GN+VE V+++RS+MG+IR+L NMD+DEVFA+AKKI+A YDLV QTKQ Sbjct: 1 LIKEIKAAVTIPVMAKARIGHFVEAQILESIGVDYVDESEVLTPADEDHHINKHNFQIPFVCGLSIPRGAPPPAYRRGYAGHDTGPRVRKP--STGNVVEAVRHIRSVMGEIRLLRNMDDDEVFAYAKKISAAYDLVMQTKQ 140
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PYRCJ (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pdxS PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.579e-36 Identity = 85/194 (43.81%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFA--FAKKIAAPYDLVAQT 834 +K G MLR G I++V++VEQA++AE AGA +MV + G+ RM D +++ V A+++PV ++VR+GHF EA +LE IG+D IDESEVL DE + INK F+ PFV G R L EALRRI EGA+MIR +G+ +GN+ E VK+ +++ G +R L +DE + +A++ P ++V T Sbjct: 47 VKLGFIAMLRRGVIMDVTNVEQAQVAEEAGAVGVMVLDKLPYDVRKAGGVARMADLKIIEEVMDAITIPVSAKVRIGHFYEAVLLEQIGVDLIDESEVLTPVDEQHHINKWLFKTPFVNGARELCEALRRISEGASMIRSKGE-AGTGNVAEAVKHFKAIYGAVRDLTAHRDDEEYLRDYARRCQVPLEVVKLT 239
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DESK1 (Pyridoxal biosynthesis lyase pdxS OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=pdxS PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.478e-34 Identity = 82/196 (41.84%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILN----NMDEDEVFAFAKKIAAPYDLVAQT 834 +K G ML+GG I++V++ EQA IAE AGA +MV + G+ R D +++ V ++++PV ++ R+GH EA++LE +G+D IDESEVL DE INK F+ PFV G R+L EALRRI EGA+MIR +G+ +GN+ E VK+++ + DI +LN N D + ++ ++K+ PY+L T Sbjct: 44 VKYGFVSMLKGGVIMDVTNPEQAIIAEEAGAVGVMVLDKLPYDVRMAGGVARTADVKVIEEVMSSITIPVSAKCRIGHEFEARVLEEVGVDLIDESEVLTPVDEKAHINKWLFKTPFVNGARSLPEALRRIYEGASMIRTKGE-PGTGNVAEAVKHIKIVNRDIYMLNGYYRNGDVEAIWVYSKENRVPYELALLT 238
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_HYPBU (Pyridoxal biosynthesis lyase pdxS OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pdxS PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.807e-32 Identity = 77/196 (39.29%), Postives = 123/196 (62.76%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNM----DEDEVFAFAKKIAAPYDLVAQT 834 ++ G ML+GG +++V++ +QA+IAE AGA +MV + G+ R D +++++V +++PV ++ R+GH+ EA++LE IG+D IDESEVL DE I K FR PFV G R+L EALRRI EGA+MIR +G+ +GN+ E V++++++ DI +L D + + +AK P++L T Sbjct: 44 VRYGFISMLKGGVVMDVTNEQQAEIAEDAGAVGVMVLDKLPYDVRKAGGVARTADLNVIRAVMETITIPVSAKCRIGHYWEAKLLEEIGVDLIDESEVLTPTDEKAHIWKWEFRVPFVNGARSLPEALRRIWEGASMIRTKGE-AGTGNVAEAVRHMKAVNRDIAVLRGYYKAGDIEAIRLYAKSNNVPFELALLT 238
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METVA (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Methanococcus vannielii GN=pdxS PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.530e-31 Identity = 68/106 (64.15%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 421 DPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSL 738 DP ++ +K AVS+PVM++ R+GHFVEAQ+LESIG+D IDESEVL ADE N INK F PFVCG RNLGEALRRI EGAAMIR +G+ +GN+VE VK++R++ Sbjct: 1 DPDMIFEIKDAVSIPVMAKARIGHFVEAQVLESIGVDMIDESEVLTPADEINHINKKAFTAPFVCGARNLGEALRRIDEGAAMIRTKGE-AGTGNVVEAVKHMRAV 105
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXL4_ARATH (Probable PDX1-like protein 4 OS=Arabidopsis thaliana GN=PDX1L4 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAK-KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE 390 MA G V VYG A+T+ K K+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E Sbjct: 1 MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALE 63 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |