FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRATN (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. novicida (strain U112) GN=pdxS PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +IK GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + VS+PVM++ R+GHFVEAQILES+G+D+IDESEVL ADE N I+K +F+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + N D+ E+ A AK + APYDLV Sbjct: 5 NIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRATM (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=pdxS PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +IK GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + VS+PVM++ R+GHFVEAQILES+G+D+IDESEVL ADE N I+K +F+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + N D+ E+ A AK + APYDLV Sbjct: 5 NIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRATH (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain LVS) GN=pdxS PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +IK GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + VS+PVM++ R+GHFVEAQILES+G+D+IDESEVL ADE N I+K +F+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + N D+ E+ A AK + APYDLV Sbjct: 5 NIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRATF (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=pdxS PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +IK GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + VS+PVM++ R+GHFVEAQILES+G+D+IDESEVL ADE N I+K +F+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + N D+ E+ A AK + APYDLV Sbjct: 5 NIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRAT1 (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pdxS PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +IK GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + VS+PVM++ R+GHFVEAQILES+G+D+IDESEVL ADE N I+K +F+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + N D+ E+ A AK + APYDLV Sbjct: 5 NIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CORDI (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium diphtheriae GN=pdxS PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 104/191 (54.45%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K GLA ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L++ + AVS+PVM++ R+GHFVEAQILES+G+D+IDESEVL AD N I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ E VK++R++ G+I L +MDED+++ AK+I APYDLV + Sbjct: 12 VKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRAQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLSPADYVNHIDKWNFDVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSEAVKHLRTIRGEINRLRSMDEDQLYVAAKEIQAPYDLVRE 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PARUW (Pyridoxal biosynthesis lyase pdxS OS=Protochlamydia amoebophila (strain UWE25) GN=pdxS PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.270e-51 Identity = 107/195 (54.87%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +K F IK LA+ML+GG I++V++ EQAKIAE AGA ++M E PS + GI RM +P L++ ++ VS+PVM++ R+GHFVEAQILES+ +D+IDESEVL ADE N I+KH F+ PFVCGCR+LGEALRRI EGAAMIR +G+ +GN+VE V+++R++ +IR L MD E+ A AK++ AP+ LV Sbjct: 8 EKGSFEIKVALAEMLKGGVIMDVTNSEQAKIAEDAGAVAVMALERIPSDIRVQGGIARMSNPELIQKIQETVSIPVMAKCRIGHFVEAQILESLQVDFIDESEVLTPADEENHIDKHIFKVPFVCGCRDLGEALRRIGEGAAMIRTKGE-AGTGNVVEAVRHMRAINREIRHLMLMDSSELMAEAKRLGAPFHLV 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEPX (Pyridoxal biosynthesis lyase pdxS OS=Thermoanaerobacter sp. (strain X514) GN=pdxS PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.965e-51 Identity = 104/196 (53.06%), Postives = 143/196 (72.96%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + + LAQML+GG I++V++ EQA IAE AGA ++M E +R G+ RM DP ++K +K AVS+PVM++VR+GHFVEAQILE++G+D+IDESEVL ADE I+K F+ PFVCG RNLGEALRRI EGA+MIR +G+ +GN+VE V+++R + +I+ L + EDE+ A AK++ APYDLV Q Sbjct: 5 YELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHIDKWAFKIPFVCGARNLGEALRRIGEGASMIRTKGE-AGTGNVVEAVRHMRIINAEIKRLTTLREDELMAAAKELQAPYDLVKYVAQ 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THETN (Pyridoxal biosynthesis lyase pdxS OS=Thermoanaerobacter tengcongensis GN=pdxS PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51 Identity = 102/196 (52.04%), Postives = 144/196 (73.47%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + + LAQML+GG I++V++ E+A IAE AGA ++M E +R G+ RM DP ++K +K AVS+PVM++VR+GHFVEAQILE++G+D+IDESEVL ADE INK +F+ PFVCG +NLGEALRRI EGA+MIR +G+ +GN+VE V+++R + +I+ L + E+E+ A AK++ APYDLV Q Sbjct: 5 YELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFKVPFVCGAKNLGEALRRIAEGASMIRTKGE-AGTGNVVEAVRHMRMINAEIKRLTTLGEEELMAAAKELQAPYDLVKYVAQ 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEP3 (Pyridoxal biosynthesis lyase pdxS OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=pdxS PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.627e-51 Identity = 103/196 (52.55%), Postives = 143/196 (72.96%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + + LAQML+GG I++V++ EQA IAE AGA ++M E +R G+ RM DP ++K +K AVS+PVM++VR+GHFVEAQILE++G+D+IDESEVL ADE I+K F+ PFVCG RNLGEALRRI EGA+MIR +G+ +GN+VE V+++R + +I+ L + EDE+ A AK++ APY+LV Q Sbjct: 5 YELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHIDKWAFKIPFVCGARNLGEALRRIGEGASMIRTKGE-AGTGNVVEAVRHMRIINAEIKRLTTLREDELMAAAKELQAPYELVKYVAQ 199 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |