FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CORGL (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium glutamicum GN=pdxS PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 8.627e-51 Identity = 105/208 (50.48%), Postives = 147/208 (70.67%), Query Frame = 1 Query: 235 GGSAITDAKKN---PFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 G S +T+ ++ +K GLA ML+GG I++V + EQA+IAE AGA ++M E S+ G+ RM DP L++ + AVS+PVM++ R+GHFVEAQ+LE++G+D+IDESEVL AD + INK F PFVCG NLGEALRRI EGAAMIR +G+ +G++ E V+++R++ GDI L ++DEDE+F AK+ APYDLV + Sbjct: 15 GSSVMTETQETYQATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRSQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQVLEALGVDFIDESEVLSPADYTHHINKWKFDVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSEAVRHLRTIRGDINRLRSLDEDELFVAAKEFQAPYDLVRE 221
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_FRAP2 (Pyridoxal biosynthesis lyase pdxS OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pdxS PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.472e-50 Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 1 Query: 274 SIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 ++K GLA+ML+GG I++V + EQA+IA+ AGA ++M E GI RM DP L+K + S+PVM++ R+GHFVEAQILES+G+D+IDESEVL AD+ N I K NF+ PFVCGC NLGEALRRI EGAA+IR +G+ +GNIVE V+ +R + DI + D+ E+ A AK + APYDLV Sbjct: 5 NLKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVTSIPVMAKARIGHFVEAQILESLGVDFIDESEVLSPADDLNHIAKDNFKVPFVCGCTNLGEALRRIGEGAALIRTKGE-AGTGNIVEAVRQLRQVNKDINYIKGADQSELMAIAKNMQAPYDLV 193
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DESDA (Pyridoxal biosynthesis lyase pdxS OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=pdxS PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.281e-50 Identity = 101/188 (53.72%), Postives = 140/188 (74.47%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDL 822 +K GLA+ML+GG I++V++ EQAKIAE AGAC++M E + G+ RM DP++VK + ++PVM++ R+GHFVEA+ILES+G+DYIDESEVL AD+ I+K +F PFVCGCRNLGEALRRI EGAAMIR +G+ +GN+VE V++ R +M ++R+L + E EV FAK++ AP +L Sbjct: 8 LKTGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTIVKKIMEVATIPVMAKARIGHFVEARILESMGVDYIDESEVLTPADDKYHIDKRDFTVPFVCGCRNLGEALRRIAEGAAMIRTKGE-PGTGNVVEAVRHCRQVMDEVRMLCALPEAEVPNFAKEMGAPLEL 194
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CLOAB (Pyridoxal biosynthesis lyase pdxS OS=Clostridium acetobutylicum GN=pdxS PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.538e-50 Identity = 98/185 (52.97%), Postives = 140/185 (75.68%), Query Frame = 1 Query: 289 LAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 LAQML+GG I++V + EQA IAE AGAC++M E + G+ RM DP ++K ++ +V++PVM++VR+GHFVEA+IL+S+G+D+IDESEVL AD+ I+K F+ PFVCG RNLGEALRRI EGA+MIR +G+ +GN+VE VK++R++M +IR + N ++E+ AK++ APYDLV Sbjct: 12 LAQMLKGGVIMDVINKEQAIIAEKAGACAVMALERVPADIRKQGGVARMSDPKMIKEIRESVTIPVMAKVRIGHFVEAEILQSLGIDFIDESEVLTPADDSYHIDKKAFKVPFVCGARNLGEALRRIGEGASMIRTKGE-AGTGNVVEAVKHMRTVMDEIRRVKNAAKEEIMTIAKELGAPYDLV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_SYNAS (Pyridoxal biosynthesis lyase pdxS OS=Syntrophus aciditrophicus (strain SB) GN=pdxS PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.624e-49 Identity = 102/198 (51.52%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTK 837 K + + LAQML+GG I++V++VEQA+IAE AGA ++M E ++ G+ RM DPS++ +K++VS+PVM++ R+GHFVEAQILE++ +DYIDESEVL ADE I+K F PFVCG RNLGEALRRI EGAAMIR +G+ +GN+VE V+++R++ +IR L M +EV FAK PY+L Q + Sbjct: 3 KKRYELNVQLAQMLKGGVIMDVTNVEQARIAEDAGAVAVMALERVPADIRAQGGVARMSDPSMIVEIKKSVSIPVMAKARIGHFVEAQILEALKIDYIDESEVLTPADEECHIDKTRFSIPFVCGARNLGEALRRIAEGAAMIRTKGE-AGTGNVVEAVRHMRTMNREIRQLVGMPVEEVTVFAKSNGIPYELALQVR 199
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BACCN (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pdxS PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 96/194 (49.48%), Postives = 142/194 (73.20%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAE AGA ++M E + G+ RM DP++V+ V AVS+PVM++ R+GH VEA++LES+G+DYIDESEVL ADE N +NK ++ PFVCGCR++GEA RRI EGA+M+R +G+ +GNIVE V+++R + +IR + N+ EDE+ +AK APY+++ + K+ Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESLGVDYIDESEVLTPADEVNHLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGE-PGTGNIVEAVRHMRQVNAEIRQVANLREDELMTYAKNTGAPYEVLLEIKR 202
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTU (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis GN=pdxS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/191 (51.31%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++VR+GHFVEAQIL+++G+DYIDESEVL AD + I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L +M EDE+F AK++ APY+LVA+ Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAE 203
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pdxS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/191 (51.31%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++VR+GHFVEAQIL+++G+DYIDESEVL AD + I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L +M EDE+F AK++ APY+LVA+ Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAE 203
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBT (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pdxS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/191 (51.31%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++VR+GHFVEAQIL+++G+DYIDESEVL AD + I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L +M EDE+F AK++ APY+LVA+ Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAE 203
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBP (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pdxS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/191 (51.31%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++VR+GHFVEAQIL+++G+DYIDESEVL AD + I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L +M EDE+F AK++ APY+LVA+ Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAE 203 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |