FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBO (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis GN=pdxS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/191 (51.31%), Postives = 142/191 (74.35%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP +++ + AV++PVM++VR+GHFVEAQIL+++G+DYIDESEVL AD + I+K NF PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R++ G+IR L +M EDE+F AK++ APY+LVA+ Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGE-AGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAE 203
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEP1 (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pdxS PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.055e-48 Identity = 98/202 (48.51%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 253 DAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + KK + IK G A+M +GG I++V+S EQAKIAE AGA ++M E G+ RM + ++ + AVS+PVM++VR+GH EA+ILE +G+D+IDESEVL AD+ INKH F+ PFVCG R+LGEALRRI EGAAMIR +G+ +GN+VE VK++R +M I+ + M+++E+ A+ K+I AP +L+ + K+ Sbjct: 2 EIKKGTWIIKKGFAEMFKGGVIMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEELGVDFIDESEVLTPADDRFHINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGE-AGTGNVVEAVKHMRRMMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKR 202
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_PROAC (Pyridoxal biosynthesis lyase pdxS OS=Propionibacterium acnes GN=pdxS PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.055e-48 Identity = 99/191 (51.83%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K GLA ML+GG I++V + EQAKIAE AGAC++M E ++ G+ RM DP L++ + AVS+PVM++ R+GHFVEAQ+LES+ +D+IDESEVL AD N I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ E V+++R++ ++ L++M DE++ AK++ APYDLVA+ Sbjct: 19 VKRGLADMLKGGVIMDVVTPEQAKIAEDAGACAVMALERVPADIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLESLRVDFIDESEVLSPADYANHIDKWAFGVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSEAVRHLRTIRAEMARLSSMSPDELYVAAKELQAPYDLVAE 208
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THESQ (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga sp. (strain RQ2) GN=pdxS PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 98/202 (48.51%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 253 DAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + KK + IK G A+M +GG I++V+S EQAKIAE AGA ++M E G+ RM + ++ + AVS+PVM++VR+GH EA+ILE +G+D+IDESEVL AD+ INKH F+ PFVCG R+LGEALRRI EGAAMIR +G+ +GN+VE VK++R +M I+ + M+++E+ A+ K+I AP +L+ + K+ Sbjct: 2 EIKKGTWIIKKGFAEMFKGGVIMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEELGVDFIDESEVLTPADDRFHINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGE-AGTGNVVEAVKHMRRVMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKR 202
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_THEMA (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga maritima GN=pdxS PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 98/202 (48.51%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 253 DAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + KK + IK G A+M +GG I++V+S EQAKIAE AGA ++M E G+ RM + ++ + AVS+PVM++VR+GH EA+ILE +G+D+IDESEVL AD+ INKH F+ PFVCG R+LGEALRRI EGAAMIR +G+ +GN+VE VK++R +M I+ + M+++E+ A+ K+I AP +L+ + K+ Sbjct: 2 EIKKGTWIIKKGFAEMFKGGVIMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEELGVDFIDESEVLTPADDRFHINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGE-AGTGNVVEAVKHMRRVMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKR 202
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_GEOKA (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus kaustophilus GN=pdxS PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 98/194 (50.52%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAEAAGA ++M E + G+ RM DP++++ V AVS+PVM++VR+GH+VEA++LE++G+DYIDESEVL ADE I+K F PFVCGCR+LGEA RRI EGA+M+R +G+ +GNIVE V+++R + IR + NM EDE+ A AK++ AP +++ + K+ Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEAKQLGAPVEVLREIKR 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DESHY (Pyridoxal biosynthesis lyase pdxS OS=Desulfitobacterium hafniense (strain Y51) GN=pdxS PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 100/191 (52.36%), Postives = 138/191 (72.25%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 + + LAQML+GG I++V++ EQAKIAEAAGAC++M E + G+ RM DP ++K + AVS+PVM++ R+GHFVEAQILE++ +DYIDESEVL AD+ I+K F+ PFVCG ++LGEALRRI EGAAMIR +G+ +G+IV+ V+++R + I L M EDE+F AK++ PYDLV Sbjct: 6 YELNKELAQMLKGGVIMDVTTPEQAKIAEAAGACAVMALERIPADIRAVGGVSRMSDPKMIKGIMEAVSIPVMAKCRIGHFVEAQILEAVEIDYIDESEVLSPADDVYHIDKTRFKVPFVCGAKDLGEALRRINEGAAMIRTKGE-PGTGDIVQAVRHMRMINRQISRLAGMREDELFQEAKELQVPYDLV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_DESHD (Pyridoxal biosynthesis lyase pdxS OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=pdxS PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 100/191 (52.36%), Postives = 138/191 (72.25%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 + + LAQML+GG I++V++ EQAKIAEAAGAC++M E + G+ RM DP ++K + AVS+PVM++ R+GHFVEAQILE++ +DYIDESEVL AD+ I+K F+ PFVCG ++LGEALRRI EGAAMIR +G+ +G+IV+ V+++R + I L M EDE+F AK++ PYDLV Sbjct: 6 YELNKELAQMLKGGVIMDVTTPEQAKIAEAAGACAVMALERIPADIRAVGGVSRMSDPKMIKGIMEAVSIPVMAKCRIGHFVEAQILEAVEIDYIDESEVLSPADDVYHIDKTRFKVPFVCGAKDLGEALRRINEGAAMIRTKGE-PGTGDIVQAVRHMRMINRQISRLAGMREDELFQEAKELQVPYDLV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_SUBDO (Probable pyridoxine biosynthesis SNZERR OS=Suberites domuncula GN=SNZERR PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.349e-48 Identity = 94/204 (46.08%), Postives = 141/204 (69.12%), Query Frame = 1 Query: 241 SAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQT 834 SA ++ + ++K GLAQML+GG I++V + +QA++AE AGAC++M E G+ RM DP +K + V+VPVM++ R+GHF EAQIL+++G+D+IDESEVL AD+ N ++K F PFVCG R+LGEALRRI EGAAMIR +G+ +GN+VE V++ R + +IR+ + E++ +AK++ P DL+ +T Sbjct: 7 SATSETQTGTMTVKTGLAQMLKGGIIMDVINADQARVAEEAGACAVMALEKVPADIRKDGGVARMADPRKIKEIMDTVTVPVMAKCRIGHFAEAQILQNLGVDFIDESEVLSPADDENHVDKQPFNVPFVCGARSLGEALRRISEGAAMIRTKGE-AGTGNVVEAVRHARQINREIRVAQCLSSAELYGYAKQLGVPLDLLQKT 209
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_METLZ (Pyridoxal biosynthesis lyase pdxS OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pdxS PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.068e-48 Identity = 97/194 (50.00%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + LAQML+GG I++V+S EQAKIAE AGAC++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ N I+K+ F PFVCG R+LGEALRR+ EGA MIR +G+ +G+IV+ V+++R++ +IR + ++ +DE++ AK + P L+ Sbjct: 3 ENRSKLNKELAQMLKGGVIMDVTSPEQAKIAEDAGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQNAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDLNHIDKNKFNVPFVCGARDLGEALRRVAEGATMIRTKGE-AGTGDIVQAVRHMRTMNSEIRRVVSLRQDELYVAAKDMQVPISLL 195 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |