FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CLOCE (Pyridoxal biosynthesis lyase pdxS OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=pdxS PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.068e-48 Identity = 95/191 (49.74%), Postives = 140/191 (73.30%), Query Frame = 1 Query: 271 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 + + LAQML+GG I++V + ++A+IA+ AGA ++M E PS G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQ+LE++ +DYIDESEVL ADE I+KH F+ PFVCG +NLGEALRRI EGA+MIR +G+ +GN+VE V+++R++ +IR + + + E+ AK+ APYDL+ Sbjct: 5 YQLNKNLAQMLKGGVIMDVVNAKEAEIAQKAGAVAVMALERVPSDIRKAGGVARMSDPKMIKDIQSAVSIPVMAKVRIGHFVEAQVLEALSIDYIDESEVLTPADEEFHIDKHTFKVPFVCGAKNLGEALRRISEGASMIRTKGE-AGTGNVVEAVRHMRTVTNEIRKVQSASKQELMTIAKEFGAPYDLI 194
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_GEOTN (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pdxS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.007e-48 Identity = 98/194 (50.52%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAEAAGA ++M E + G+ RM DP++V+ V AVS+PVM++VR+GH+VEA++LE++G+DYIDESEVL ADE I+K F PFVCGCR+LGEA RRI EGA+M+R +G+ +GNIVE V+++R + IR + +M EDE+ A AK++ AP +++ + K+ Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVVEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQIRKVVSMSEDELVAEAKQLGAPVEVLREIKR 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_MYCS2 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium smegmatis GN=pdxS PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.234e-48 Identity = 96/191 (50.26%), Postives = 139/191 (72.77%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K G+A+ML+GG I++V + EQA+IAEAAGA ++M E ++ G+ RM DP +++ + AV++PVM++ R+GHFVEAQIL+S+G+DY+DESEVL AD N I+K F PFVCG NLGEALRRI EGAAMIR +G+ +G++ ++R + G+IR L +M EDE++ AK++ APY+LV + Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQARIAEAAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTNHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAKELQAPYELVVE 207
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_BACHD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus halodurans GN=pdxS PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.234e-48 Identity = 98/194 (50.52%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 277 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 +K G+A+M +GG I++V + EQAKIAE AGA ++M E + G+ RM DP++V+ V AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL ADE +NK +F PFVCG R+LGEA RRI EGA+MIR +G+ +GNIVE V+++R + IR ++NM DE+ AK I APY+L+ K+ Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKCRIGHIVEARVLEALGVDYIDESEVLTPADEVYHLNKRDFTVPFVCGARDLGEAARRIGEGASMIRTKGE-PGTGNIVEAVRHMRMMQAQIRKVSNMSTDELMTEAKNIGAPYELLLSIKE 201
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRZT (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pdxS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRZP (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain P1031) GN=pdxS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRZJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain JJA) GN=pdxS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRR6 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pdxS PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRPN (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae GN=pdxS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_STRPJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=pdxS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLV 825 +N + + LAQML+GG I++V + EQA+IAEAAGA ++M E + G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE+I +DYIDESEVL AD+ ++K F+ PFVCG ++LGEALRRI EGA+MIR +G+ +G+IV+ V+++R + +IR + N+ EDE++ AK + P +LV Sbjct: 3 ENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGE-PGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELV 195 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |