FC877879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: TSSP_MOUSE (Thymus-specific serine protease OS=Mus musculus GN=Prss16 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.348e-25 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 748 LD F+ +D TF QRY +N H G + P+FL+ G EG + +V +G +AP +GA+++ EHR+YG SMP G ++A L YL++ ALAD A L L+ + +SP + FGGSY G LA W RLK+PH+ A+ASSAP+ Sbjct: 65 LDPFNASDRRTFLQRYWVNDQHRTGQDV--PVFLHIGGEGSLGPGSVMAGHPAALAPAWGALVISLEHRFYGLSMPAGGLDLAL-----LRYLSSRHALADVASARQALSGLLNVSSSSPWICFGGSYAGSLATWARLKFPHLVFAAVASSAPL 211
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: YM9I_CAEEL (Putative serine protease F56F10.1 OS=Caenorhabditis elegans GN=F56F10.1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20 Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 2 Query: 290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEG--DIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGEL 862 LDHF + T++Q+Y N V IFL G EG + +W A + A FGA + EHR++G+S P + ++L YLT +QALAD A FI + Q + V FGGSY G LAAW R KYP + +G++ASSAP+ D + +V D + C K+++ ++ Sbjct: 63 LDHFDPYNTKTWNQKYFYNP---VFSRNNSIIFLMIGGEGPENGKWAANPNVQYLQWAKEFGADVFDLEHRFFGDSWP-----IPDMQTSSLRYLTTQQALADLAFFIEFMNQQYGFKNPRWVTFGGSYPGSLAAWFRQKYPQLTVGSVASSAPVNLKLDFY---EYAMVVEDDLRITDPKCAQATKDAFVQM 244
BLAST of FC877879 vs. ExPASy Swiss-Prot
Match: YM67_CAEEL (Putative serine protease K12H4.7 OS=Caenorhabditis elegans GN=K12H4.7 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19 Identity = 67/207 (32.37%), Postives = 98/207 (47.34%), Query Frame = 2 Query: 290 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIE--WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVRQKENGLLEL 901 LDHF + TF QRY N + W GP FL G EG W + + ++A + GA + EHR+YGE+ P V L YL++ QA+ D A FI + A+ V FGGSY G LAAW R K+P + A+ SS P+ D + + +V + R S C ++ + + + S+ Q +G +L Sbjct: 67 LDHFDSSVGKTFQQRYYHN-NQWYKAG--GPAFLMLGGEGPESSYWVSYPGLEITNLAAKQGAWVFDIEHRFYGETHPTSDMSVP-----NLKYLSSAQAIEDAAAFIKAMTAKFPQLANAKWVTFGGSYSGALAAWTRAKHPELVYAAVGSSGPVQAEVDF---KEYLEVVQNSITRNSTECAASVTQGFNLVASLLQTSDGRKQL 262 The following BLAST results are available for this feature:
BLAST of FC877879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877879 ID=FC877879; Name=FC877879; organism=Citrus clementina; type=EST; length=903bpback to top |