FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_HERAR (4-hydroxybenzoate octaprenyltransferase OS=Herminiimonas arsenicoxydans GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 70/199 (35.18%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L RL+KPIG  LL WP +W++ +A+     PD+ ++              C +ND  DRD D  V+RT  RP+ SG + P                     N  ++ L  +++++  +YP  KRF   PQAYLG+ F +G  +G+AAV+ ++  A  + + ++ VFW + YDT YA  D+EDDLK+G+K++A+ FG
Sbjct:    7 YFRLVRLNKPIGILLLLWPTLWALWLASDGK--PDWTLLAIFTLGTILMRSAGCAINDYADRDFDKYVQRTVDRPVTSGKIQPREALLVALALALLSFALIWPLNTLTKQLSIAAVIIAGTYPYFKRFFAIPQAYLGIAFGFGIPMGFAAVQNTVPAAAWW-LLVANVFWAVAYDTEYAMVDREDDLKLGMKTSAITFG 202          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEPA (4-hydroxybenzoate octaprenyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 74/214 (34.58%), Postives = 112/214 (52.34%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y +LAR+D+PIGT LL WPC+ ++T AA  G  PD K+               C +ND  DR +D  VERT+ RP+ASG ++                      N     L    ++L   YP  KR+T  PQ +LG  ++W   + +AA  G++ +   + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F +A +
Sbjct:   10 YMRLARMDRPIGTLLLLWPCLMALTFAA--GGLPDLKVFIIFVIGVFSMRACGCIINDYADRKLDAHVERTKGRPLASGEVSSKEALLLFVVMALFSFGLVLMLNPLVVQLSVIGIILTIIYPFTKRYTNMPQMFLGTVWSWSIPMAYAAQTGTVPVEAWW-LFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGRYDRQIIGLFQLAAL 220          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_RALME (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P +   YA+L R+DKPIGT LL WP +W++ MAA  G  P + +               C +ND  DRD D  V+RT+ RP+ +GL+                       N  ++ L   + +L  +YP  KRF   PQAYLG+ F +G  + +AA++  +   V + M ++ VFW + YDT YA  D++DDL +G+K++A+ FG
Sbjct:   11 PSRLALYARLVRIDKPIGTLLLLWPTLWAMWMAA--GGPPGWTLFWIFFAGTFLMRSAGCAMNDWADRDFDKHVKRTKERPLTAGLIASWEALAVAAVLALIALALILPLNALTKWLAVVAAVLAGTYPFFKRFFAIPQAYLGIAFGFGIPMAFAAIQDQVPF-VAWLMLLANVFWAIAYDTAYAMVDRDDDLLLGMKTSAITFG 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEF5 (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + +LAR+DKPIG +LL WP + ++ +AA     P    +              C +ND  DR +D  V+RT  RP+A+G ++                      N  +  L   +L L   YP MKR+T++PQ  LG  ++WG L+ + A  G L  A  + +YI+ + WT+ YDT YA  D++DDLK+GVKSTA+ FGD+ +
Sbjct:   19 FLQLARMDKPIGIYLLLWPTLVALWIAAEGQ--PSLSHVLIFTFGVVLTRAGGCAINDFADRKVDGQVKRTDQRPLATGKVSAKEALILFAVLMGAAFLLVLCTNATTVWLSFGALALAACYPFMKRYTYYPQVVLGAAYSWGILMTFTAQNGELP-ATAWLLYIANLLWTVGYDTYYAMTDRDDDLKIGVKSTAILFGDADR 218          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_HAHCH (4-hydroxybenzoate octaprenyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 75/211 (35.55%), Postives = 107/211 (50.71%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGI 915
            Y  L RL++PIGT+LL WP +W++ +A+     P  K +              C +ND  DR ID  VERT+ RP A   +T                      N  +  L A +L L  +YP MKR T+ PQ  LG  F WG  + +AA   ++     + +Y + V WT+ YDT+YA  D+EDDLK+GVKSTA+ FG++ +    G  +
Sbjct:   22 YIGLTRLNRPIGTYLLLWPTLWALWLASEGA--PSLKNLFIFVFGVLLMRSAGCVINDYADRRIDMHVERTKGRPFAQNQVTEKEALTLFGILVGVSFILVLFTNALTIYLSAGALALASTYPFMKRHTYLPQVVLGAAFAWGIPMAFAAELDAVPQQA-WLLYTATVVWTVAYDTMYAMADREDDLKIGVKSTAILFGEADRAAVAGLQV 229          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_HAES2 (4-hydroxybenzoate octaprenyltransferase OS=Haemophilus somnus (strain 2336) GN=ubiA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 72/199 (36.18%), Postives = 105/199 (52.76%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AY +L RLDKPIGT LL WP +W++ +A      P   ++              C +ND  DR ID  V+RT LRP+++G  TP                     N ++  L   +++L F YP MKR+T  PQ +LG  F W   + + A   +L L   + ++I+ + WT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   11 AYGQLMRLDKPIGTLLLLWPTLWALYLAEKA--MPTLSVLAIFIFGVFLMRSAGCVINDYADRHIDGKVKRTSLRPLSTGRATPREAKWLFIVLVFCSFLLVLCLNLYTIGLSVIAVILAFIYPFMKRYTHLPQFFLGAAFGWSIPMAYGATIEALPLEC-WLLFIANLSWTVAYDTQYAMVDRDDDLRIGVKSTAILF 206          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_HAES1 (4-hydroxybenzoate octaprenyltransferase OS=Haemophilus somnus (strain 129Pt) GN=ubiA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 72/199 (36.18%), Postives = 105/199 (52.76%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AY +L RLDKPIGT LL WP +W++ +A      P   ++              C +ND  DR ID  V+RT LRP+++G  TP                     N ++  L   +++L F YP MKR+T  PQ +LG  F W   + + A   +L L   + ++I+ + WT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   11 AYGQLMRLDKPIGTLLLLWPTLWALYLAEKA--MPTLSVLAIFICGVFLMRSAGCVINDYADRHIDGKVKRTSLRPLSTGRATPREAKWLFIVLVFCSFLLVLCLNLYTIGLSVIAVILAFIYPFMKRYTHLPQFFLGAAFGWSIPMAYGATIEALPLEC-WLLFIANLSWTVAYDTQYAMVDRDDDLRIGVKSTAILF 206          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SERP5 (4-hydroxybenzoate octaprenyltransferase OS=Serratia proteamaculans (strain 568) GN=ubiA PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.805e-31
Identity = 73/205 (35.61%), Postives = 108/205 (52.68%), Query Frame = 1
Query:  277 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            +AY+ L R++KPIGT LL WP +W++ +A      P   ++              C VND  DR +D  V+RT  RP+ SG ++                      N  +  L  ++L L ++YP MKR T  PQ  LG  F WG  + +AAV  SL L+  + + ++ + WT+ YDT+YA  D++DDLK+G+KSTA+ FG   K
Sbjct:   11 QAYSHLMRINKPIGTLLLLWPTLWALWLAGKG--VPSLSILVVFVVGVFLMRAAGCVVNDYADRAVDGHVKRTAARPMPSGRVSEKEAKVLFVVLVLVSFGLVLTLNAMTIWLSLAALALAWAYPFMKRVTHLPQFVLGAAFGWGIPMAYAAVSESLPLSC-WLLLLANICWTVAYDTLYAMVDRDDDLKIGIKSTAILFGRYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_COLP3 (4-hydroxybenzoate octaprenyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.805e-31
Identity = 67/200 (33.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:  292 LARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + R+DKPIGT+LL WP  W++ +A+    +P+ +++              C +ND  DR ID  VERT+ RP+ +G++T                      +  +  L   ++LL   YP MKR T  PQ +LG  F+WG ++ ++  +G + L V + ++ + + WT+ YDT+YA  D++DD+K+GVKSTA+ F ++ K
Sbjct:   15 ITRMDKPIGTYLLLWPTYWALWIASDG--WPNLQLLLVFSLGVFIMRSAGCVINDYADRKIDGEVERTKNRPLVNGMMTSGEAINLFGVLIGMAFGLVLMLSWSTIYLSVVAVLLAAIYPFMKRHTQLPQLFLGAAFSWGMIMAFSEAQGEIPL-VAWLLFTANLCWTIAYDTMYAMVDRDDDVKIGVKSTAILFAENDK 211          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHIFL (4-hydroxybenzoate octaprenyltransferase OS=Shigella flexneri GN=ubiA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.150e-30
Identity = 72/204 (35.29%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   +M              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWIMAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_HERAR3.952e-3135.184-hydroxybenzoate octaprenyltransferase OS=Hermini... [more]
UBIA_SHEPA5.162e-3134.584-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_RALME5.162e-3135.124-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]
UBIA_PSEF55.162e-3135.474-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_HAHCH5.162e-3135.554-hydroxybenzoate octaprenyltransferase OS=Hahella... [more]
UBIA_HAES26.742e-3136.184-hydroxybenzoate octaprenyltransferase OS=Haemoph... [more]
UBIA_HAES16.742e-3136.184-hydroxybenzoate octaprenyltransferase OS=Haemoph... [more]
UBIA_SERP58.805e-3135.614-hydroxybenzoate octaprenyltransferase OS=Serrati... [more]
UBIA_COLP38.805e-3133.504-hydroxybenzoate octaprenyltransferase OS=Colwell... [more]
UBIA_SHIFL1.150e-3035.294-hydroxybenzoate octaprenyltransferase OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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