FC877882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHIDS (4-hydroxybenzoate octaprenyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHIBS (4-hydroxybenzoate octaprenyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHIB3 (4-hydroxybenzoate octaprenyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEPK (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida (strain KT2440) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 70/203 (34.48%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 + +L+R+D+PIG +LL WP + ++ +A P + C +ND DR +D V+RT RP+ASG + P N+ + L ++ L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT+ YDT YA D++DDLK+GVKSTA+ FGD+ + Sbjct: 19 FVQLSRMDRPIGIYLLLWPTLSAVWIAGNGS--PTLANVLIFGLGVVLMRAAGCCINDFADRKVDGHVKRTADRPLASGRVRPREALTLFAILVGVSFLLVLCTNSRTVWLSFGAVALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-AGAWLLYIANLLWTVGYDTYYAMVDRDDDLKIGVKSTAILFGDADR 218
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEP1 (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 70/203 (34.48%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 + +L+R+D+PIG +LL WP + ++ +A P + C +ND DR +D V+RT RP+ASG + P N+ + L ++ L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT+ YDT YA D++DDLK+GVKSTA+ FGD+ + Sbjct: 19 FVQLSRMDRPIGIYLLLWPTLSAVWIAGNGS--PTLANVLIFGLGVVLMRAAGCCINDFADRKVDGHVKRTADRPLASGRVRPREALTLFAILVGVSFLLVLCTNSRTVWLSFGAVALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-AGAWLLYIANLLWTVGYDTYYAMVDRDDDLKIGVKSTAILFGDADR 218
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_MARMS (4-hydroxybenzoate octaprenyltransferase OS=Marinomonas sp. (strain MWYL1) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879 YA+L R ++PIG++LL WP +W++ +AA P + ++ C +ND DR +D V+RT+ RP+ SG ++ + + +L L L YP MKR+T PQ +LGL F+W + ++A G L ++ ++++ FWT+ YDT YA D+ DDLK+G+KSTA+ FG Sbjct: 7 YAELTRFNRPIGSFLLMWPTLWALWLAADG--MPQWHLVIIFILGVFSMRSAGCVINDYADRKVDGFVDRTKNRPLPSGRVSEKEALMLFCALSILSFILVLFTDLRTILLSFVGLGLAALYPFMKRYTHLPQLFLGLAFSWAIPMAYSAQGGDLTDPKLWMLFVANCFWTIAYDTYYAMTDRPDDLKIGIKSTAILFG 203
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ESCF3 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPPLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARTLFVVLVLLAFLLVLTLNTMTILLSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECOUT (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECOSM (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECOSE (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain SE11) GN=ubiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891 A+ +L R DKPIG LL WP +W++ +A P P ++ C VND DR D V+RT RP+ SG +T N + +L ++L L + YP MKR+T PQ LG F W + +AAV S+ L+ + M+++ + W + YDT YA D++DD+K+G+KSTA+ FG K Sbjct: 12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212 The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bpback to top |