FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO81 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O81 (strain ED1a) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO7I (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO5E (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO57 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O157:H7 GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO55 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO45 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO27 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ECO24 (4-hydroxybenzoate octaprenyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            A+ +L R DKPIG  LL WP +W++ +A P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + +AAV  S+ L+  + M+++ + W + YDT YA  D++DD+K+G+KSTA+ FG   K
Sbjct:   12 AFHRLMRTDKPIGALLLLWPTLWALWVATPG--VPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSC-WLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_AZOSB (4-hydroxybenzoate octaprenyltransferase OS=Azoarcus sp. (strain BH72) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 74/202 (36.63%), Postives = 107/202 (52.97%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAA---PPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L RLDKPIG+ LL WP +W++ +AA   PP H     ++              C +ND  DRD D  VERTR RP+A+  ++                      +     L   +L L  SYP  KRF   PQAYLG+ F +G  +G+AAV+G +   + + M ++ +FW + YDT YA  D+ DDLK+G+K++A+ FG
Sbjct:   10 YGRLMRLDKPIGSLLLLWPTLWALWLAADGKPPLH-----VLVIFTIGTVLMRSAGCVINDYADRDFDGHVERTRNRPLATRAVSTREALALAAGLSALSFVLILPLDPLVIWLSFPALFLAASYPFTKRFFAIPQAYLGIAFGFGIPMGFAAVQGEVP-PIAWVMLLANIFWAVAYDTEYAMVDRPDDLKIGIKTSAITFG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_AERHH (4-hydroxybenzoate octaprenyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ubiA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 74/214 (34.58%), Postives = 111/214 (51.87%), Query Frame = 1
Query:  250 IDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            ++L    +  AY +LAR+DKPIGT LL WP +W++ +AA     PD   +              C +ND  DR+ D  V+RT  RP+  G + P                     N  +  L  ++LLL   YP MKR+   PQ  LG+ F+W   + +AA   +L  AV + ++++ + WT+ YDT YA  D++DDLK+G+KS+A+ FG   K
Sbjct:    1 MNLLTKERGLAYVQLARIDKPIGTLLLLWPTLWALWLAADG--LPDLWTLLVFVVGVFLMRSAGCVINDYADRNFDGHVKRTAGRPLPMGKVKPREVLALFAVLALISFALVLTMNPLTIGLSFAALLLAVCYPFMKRYIPIPQLVLGMAFSWSIPMAYAAQANALP-AVAWLVFLANLLWTIAYDTQYAMVDRDDDLKLGLKSSAILFGRHDK 211          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_ECO812.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO7I2.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO5E2.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO572.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO552.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO452.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO272.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_ECO242.562e-3034.804-hydroxybenzoate octaprenyltransferase OS=Escheri... [more]
UBIA_AZOSB2.562e-3036.634-hydroxybenzoate octaprenyltransferase OS=Azoarcu... [more]
UBIA_AERHH2.562e-3034.584-hydroxybenzoate octaprenyltransferase OS=Aeromon... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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