FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_RALEH (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ubiA PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.454e-30
Identity = 70/199 (35.18%), Postives = 106/199 (53.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            YA+L R+DKPIGT LL WP +W++ MAA  G  P + +               C +ND  DRD D  V+RTR RP+ +G +                       N  ++ L   + ++  +YP  KRF   PQAYLG+ F +G  + +AA++  +   V + M ++ VFW + YDT YA  D++DDL +G+K++A+ FG
Sbjct:    8 YARLVRIDKPIGTLLLLWPTLWAMWMAA--GGPPAWGLFWIFVAGTFLMRSAGCAINDWADRDFDKHVKRTRERPLTAGKIAAWEALAVAAVLALVAFALVLPLNALTKWLAVVAAVVAGTYPFFKRFFAIPQAYLGIAFGFGIPMAFAAIQDQVP-PVAWLMLLANVFWAVAYDTAYAMVDRDDDLLIGMKTSAITFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_AZOVD (4-hydroxybenzoate octaprenyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.454e-30
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + +L RLD+PIG +LL WP +W++ +AA     P  K +              C +ND  DR+ D  V RTR RP+A+G +                       + F+  L   +L +   YP MKR+T  PQ  LG  ++WG  + + A  G L L   + ++ + + WT+ YDT YA  D+EDDLK+GVKSTA+ FG + +
Sbjct:   19 FIQLVRLDRPIGIYLLLWPTLWAVWIAADGS--PSLKHVLIFTCGVILMRSAGCVINDFADRNFDGHVARTRQRPLATGRIRTREAWALFAVLVALSFGLVLLTDPFTVALSFGALAVASLYPFMKRYTHLPQLVLGAAYSWGIPMAFTAATGRLPLEA-WLIFAANLAWTVAYDTYYAMTDREDDLKIGVKSTAILFGAADR 218          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ACIAD (4-hydroxybenzoate octaprenyltransferase OS=Acinetobacter sp. (strain ADP1) GN=ubiA PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.454e-30
Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:  277 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            +AY  L R DKPIGT L+ WP MW++ +A+    +PD KM               C +ND  DR +D  V RT+ RP+A+G++ P                        +      +L L F YP MKR+T  PQ +LG  F+W   + + A   + DL   + +Y   + WT+ YDT YA  D+E DLK+GVKSTA+ F
Sbjct:   11 QAYYYLCRFDKPIGTELVFWPTMWALWIASDG--YPDLKMFVVMTLGVLFMRAAGCAINDFADRKVDGHVARTKQRPLATGIIRPIEAIWVFLALVAASAALLLFLPIETFYWSFGALFLAFIYPFMKRYTHLPQVFLGAAFSWAIPMAYTATGQAPDLTC-WLLYFGNLAWTVAYDTQYAITDREYDLKIGVKSTAILF 207          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NITEU (4-hydroxybenzoate octaprenyltransferase OS=Nitrosomonas europaea GN=ubiA PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.735e-30
Identity = 72/200 (36.00%), Postives = 105/200 (52.50%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            AY +L RLDKPIG  LL WP +W + +AA     PD  ++              C +ND  DR ID  V RTR RP+A+GL+T                      N  +  L   +L L  SYP  KRF   PQAYLG+ F++G  + +AA  G++   + + + ++ +FW + YDT YA  D+ DDLK+G++++A+  G
Sbjct:    9 AYTRLIRLDKPIGILLLLWPTLWGLWLAADG--MPDPMILVIFILGTILMRSAGCAINDFADRRIDPHVSRTRNRPLAAGLITAREALLIAAGLSLCAFLLILPLNLLTIQLSVPALFLAASYPFTKRFFAMPQAYLGIAFSFGIPMAFAAQTGTVP-PLAWLLVLANLFWVIAYDTEYALVDRADDLKIGIRTSAITLG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PROST (4-hydroxybenzoate octaprenyltransferase OS=Providencia stuartii GN=ubiA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.661e-29
Identity = 71/204 (34.80%), Postives = 105/204 (51.47%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            AY++L R+D+PIG+ LL WP  W++ +AA     P   ++              C +ND  DR  D  VERT+ RP+ SG +T                      N+ +  L  + L L + YP +KR +   Q  LG  F W   +G++AV  SL L V + +++  + W+++YDT YA  D+ DDLK+GVKSTA+ FG   K
Sbjct:   12 AYSRLMRIDRPIGSLLLLWPTYWALWIAAQS--IPSLHILIVFTAGVFLMRAAGCVINDFADRHFDGHVERTKHRPLPSGDVTEKEAKILFASLVGLSFLLVLTLNSMTIWLSVAGLALAWIYPFVKRVSHLLQVVLGAAFGWSIPMGFSAVSESLPL-VCWVLFLVNILWSVIYDTQYAMVDRNDDLKIGVKSTAILFGQYDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SODGM (4-hydroxybenzoate octaprenyltransferase OS=Sodalis glossinidius (strain morsitans) GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = 1
Query:  277 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            +A+ +L R+DKPIG+ LL WP +W++ +A      P    +              C +ND  DR ID  V+RTR RP+ SG +                       N+ +  L   +L L + YP MKR+T  PQ  LG  F W   + + AV  SL L+  + ++++ + WT+ YDT YA  D++DDL++GVKSTA+ FG   K
Sbjct:   11 QAWCRLMRIDKPIGSLLLLWPTLWALWLAGMA--IPALGTLTVFILGVFFMRAAGCVINDYADRKIDGHVKRTRARPLPSGAIGEKEAKLLFGALVGISFALVLTLNSMTIALSTVALALAWVYPFMKRYTHLPQLVLGAAFGWSIPMVFTAVSESLPLSC-WLLFLANITWTVAYDTQYAMVDRDDDLRIGVKSTAILFGRFDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ENTS8 (4-hydroxybenzoate octaprenyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 73/204 (35.78%), Postives = 103/204 (50.49%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            AY +L R DKPIG  LL WP +W++ +A+P    P   ++              C VND  DR  D  V+RT  RP+ SG +T                      N  + +L  ++L L + YP MKR+T  PQ  LG  F W   + + AV  SL L+  + M+ + + W + YDT YA  D++DD+K+GVKSTA+ FG   K
Sbjct:   12 AYHRLMRTDKPIGALLLLWPTLWALWVASPG--VPPLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTAHRPLPSGDVTEKEARNLFVILVLLSFLLVLTLNVKTILLSVAALALAWMYPFMKRYTHLPQVVLGAAFGWSIPMAFCAVSESLPLSC-WLMFFANICWAVAYDTEYAMVDRDDDVKIGVKSTAILFGRHDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_EDWI9 (4-hydroxybenzoate octaprenyltransferase OS=Edwardsiella ictaluri (strain 93-146) GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            AY +L R+DKPIG+ LL WP  W++ +A   G  P  K++              C +ND  DR  D  V+RT  RP+  G L+                      N  +  L  ++L L + YP +KRF+  PQ  LG+ F W   + +AAV  SL L+  + ++ + + WT+ YDT YA  D++DDL++G+KSTA+ FG
Sbjct:   12 AYCRLMRIDKPIGSLLLLWPTYWALWLAG--GTAPGGKLLLVFTCGVFFMRAAGCVINDFADRHFDGHVKRTCQRPLPCGALSEREAKALFVLLVGLSFALVLTLNAMTIWLSVAALTLAWLYPFIKRFSHLPQVILGMAFGWSIPMAYAAVGESLPLSC-WLLFAANICWTVAYDTQYAMVDRDDDLRIGIKSTAILFG 208          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURP8 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.833e-29
Identity = 70/199 (35.18%), Postives = 108/199 (54.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RPI SG +                       N  ++ L  ++L +  +YP  KRF   PQAYLG+ F +G  + +AAV+  + L + + M I+ VFW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASD-GH-PSVSLLVIFALGTILMRSAGCAINDYADRDFDRYVKRTENRPITSGKIKAWEAVALAAGLSLVAFLLILPLNALTKELSVAALFVAGTYPFTKRFFAIPQAYLGIAFGFGIPMAFAAVQNQVPL-LAWVMLIANVFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANAC (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas axonopodis pv. citri GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P++   Y KL R D+PIG+ LL WP  W++ +AA     P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  + +L    + L  SYP +KR T  PQ YLG+ F WG  + +AAV+GS+ L + + +Y + + W   YDT YA  D++DD+++G KSTA+ FG
Sbjct:   18 PQRLGQYWKLVRGDRPIGSLLLLWPTWWALWLAADG--LPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVALMLVAFALVLTLNWLTVMLSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMAFAAVQGSVPL-LGWLLYAANILWATAYDTWYAMVDRDDDIRMGSKSTAILFG 219          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_RALEH7.454e-3035.184-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]
UBIA_AZOVD7.454e-3034.484-hydroxybenzoate octaprenyltransferase OS=Azotoba... [more]
UBIA_ACIAD7.454e-3036.004-hydroxybenzoate octaprenyltransferase OS=Acineto... [more]
UBIA_NITEU9.735e-3036.004-hydroxybenzoate octaprenyltransferase OS=Nitroso... [more]
UBIA_PROST1.661e-2934.804-hydroxybenzoate octaprenyltransferase OS=Provide... [more]
UBIA_SODGM2.169e-2934.634-hydroxybenzoate octaprenyltransferase OS=Sodalis... [more]
UBIA_ENTS82.169e-2935.784-hydroxybenzoate octaprenyltransferase OS=Enterob... [more]
UBIA_EDWI92.169e-2935.004-hydroxybenzoate octaprenyltransferase OS=Edwards... [more]
UBIA_BURP82.833e-2935.184-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_XANAC3.699e-2934.634-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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