FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_POLNS (4-hydroxybenzoate octaprenyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            +Y  L RLDKPIGT LL WP +W++ +A+      D  ++              C +ND  DRD D  V+RT+ RP+ SG ++                      N F++ L   +LL+ F YP  KRF   PQ  LG+ F +G  + +AA+   + L   F ++   +FW + YDT YA  D++DDL++G++++A+ FG
Sbjct:    9 SYGYLIRLDKPIGTLLLLWPTLWALWLAS--SGVLDLSILLIFVAGTFLMRSAGCAINDYADRDFDRHVKRTQGRPVTSGKISAKEAVAVASFLALCAFLLIQPLNAFTKQLSVLALLVAFIYPFTKRFFAMPQTVLGIAFGFGIPMAYAAILDFIPLEAWF-LFTGNIFWAIAYDTAYAMVDRDDDLRLGLRTSAITFG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURVG (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ubiA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+     P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+G++  A+ + M ++ VFW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASDGR--PRWPLVAIFALGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAAVLSFVAFLLILPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQGTVP-ALAWVMLVANVFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURS3 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia sp. (strain 383) GN=ubiA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++   + + M I+ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASD-GH-PRWPLLVIFSLGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAIAIAVGLAFVSFLLILPLNTLTKQLSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVP-TIAWVMLIANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURCM (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=ubiA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 69/199 (34.67%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M I+ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASD-GH-PRWPLLAIFVLGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVVLAFISFLLIQPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-LAWVMLIANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURA4 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=ubiA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 69/199 (34.67%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M I+ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASD-GH-PRWPLLAIFALGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVVLAFISFLLIQPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-LAWVMLIANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BLOPB (4-hydroxybenzoate octaprenyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=ubiA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            L+  ++    A+L R+++PIG +LL WP +W + ++      PD  ++              C +ND +D DID  V+RT+ RP+ SG++                       N  +  L   +L+L + YP +KR+ ++PQ  LGL F+W  L+ + A+   ++ +  + +++    WT+VYDT YA  D+EDD+ VG+KS+A+ FGD  K
Sbjct:    5 LFFIKKCYNLAQLMRINQPIGFFLLLWPTLWGLWLSHKG--IPDKVVLIVFVAGALCMRSAGCIINDYVDYDIDGHVQRTKTRPLPSGMIRKKEALVALSILLFIAFILVLSLNFITIFLSVVALILSWIYPYLKRYIYFPQVMLGLLFSWPILMAFTAINNPIN-STAWLLFLMNTVWTIVYDTQYAMIDREDDIYVGIKSSAVLFGDMDK 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEA6 (4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=ubiA PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.241e-29
Identity = 70/199 (35.18%), Postives = 102/199 (51.26%), Query Frame = 1
Query:  292 LARLDKPIGTWLLAWPCMWSITMAA---PPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L R DKP+G++LL WP +W++ +AA   PP H     M               C +ND  DR +D  V+RT+ RP+ SG++T                      N  + +L   +L L   YP MKR+T +PQ  LG  F W   + + AV  ++  A+ + ++   V WT+ YDT YA  D+ DDL++GVKSTA+ FG
Sbjct:   12 LMRADKPVGSYLLLWPTLWALMIAAQGLPPWHITGIFMAGVFVMRSAG-----CVINDYADRKVDGKVDRTKARPLVSGVVTEKQALGLFATLVGVAFLLVLALNWQTIVLSLGALALASVYPFMKRYTHFPQVVLGAAFGWAIPMAFMAVTEAVP-AIAWWLFAINVLWTVAYDTQYAMVDRNDDLQIGVKSTAVLFG 204          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ERWCT (4-hydroxybenzoate octaprenyltransferase OS=Erwinia carotovora subsp. atroseptica GN=ubiA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.241e-29
Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            AY +L R+DKPIG+ LL WP +W++ +A   G  P    +              C +ND  DR  D  V+RT  RP+ SG ++                      N  +  L  + L+L + YP MKR +  PQ  LG  F W   + +AAV  SL  A  + M+++ + WT+ YDT YA  D++DDLK+GVKSTA+ FG
Sbjct:   12 AYCRLMRIDKPIGSLLLLWPTLWALWLAG--GGAPAPWTLFVFVAGVFLMRAAGCVINDYADRHFDGHVKRTASRPLPSGEVSEQSAKILFVVLVLLAFGLVLTLNKMTIWLSVAGLVLAWVYPFMKRVSHLPQFVLGAAFGWSIPMAYAAVSESLP-ATCWMMFLAYICWTVAYDTQYAMVDRDDDLKIGVKSTAILFG 208          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANOR (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas oryzae pv. oryzae GN=ubiA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L  P++   Y +L R D+PIG+ LL WP  W++ +AA     P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  + +L    + L  SYP +KR T  PQ YLG+ F WG  + +AAV+GS+ + + + +Y + + W   YDT YA  D++DD+++G KSTA+ FG
Sbjct:   15 LTCPQRLGQYWQLVRGDRPIGSLLLLWPTWWALWLAADG--LPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVFTLNWLTVLLSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMAFAAVQGSVPV-LGWLLYAANILWATAYDTWYAMVDRDDDIRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANOP (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ubiA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L  P++   Y +L R D+PIG+ LL WP  W++ +AA     P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  + +L    + L  SYP +KR T  PQ YLG+ F WG  + +AAV+GS+ + + + +Y + + W   YDT YA  D++DD+++G KSTA+ FG
Sbjct:   15 LTCPQRLGQYWQLVRGDRPIGSLLLLWPTWWALWLAADG--LPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVFTLNWLTVLLSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMAFAAVQGSVPV-LGWLLYAANILWATAYDTWYAMVDRDDDIRMGSKSTAILFG 219          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_POLNS3.699e-2933.504-hydroxybenzoate octaprenyltransferase OS=Polynuc... [more]
UBIA_BURVG4.832e-2934.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURS36.310e-2934.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURCM6.310e-2934.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURA46.310e-2934.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BLOPB6.310e-2931.134-hydroxybenzoate octaprenyltransferase OS=Blochma... [more]
UBIA_PSEA68.241e-2935.184-hydroxybenzoate octaprenyltransferase OS=Pseudoa... [more]
UBIA_ERWCT8.241e-2936.004-hydroxybenzoate octaprenyltransferase OS=Erwinia... [more]
UBIA_XANOR1.406e-2833.654-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_XANOP1.406e-2833.654-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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