FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANOM (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ubiA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L  P++   Y +L R D+PIG+ LL WP  W++ +AA     P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  + +L    + L  SYP +KR T  PQ YLG+ F WG  + +AAV+GS+ + + + +Y + + W   YDT YA  D++DD+++G KSTA+ FG
Sbjct:   15 LTCPQRLGQYWQLVRGDRPIGSLLLLWPTWWALWLAADG--LPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVFTLNWLTVLLSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMAFAAVQGSVPV-LGWLLYAANILWATAYDTWYAMVDRDDDIRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NITMU (4-hydroxybenzoate octaprenyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ubiA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 73/199 (36.68%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y KL RLDKPIG  LL WP +W + +AA     P   ++              C VND  DR+ D  VERTR RP+A G ++                      N  +  L   +L L  SYP  KRF   PQAYLG+ F++G  + +AA  G +     F M  + + W + YDT YA  DK DDL++G+K++A+ FG
Sbjct:   10 YEKLMRLDKPIGILLLLWPTLWGLWLAAEG--VPRLDILLIFVLGTVLMRSAGCVVNDYADRNFDGHVERTRTRPLALGAVSTREALLLAAGLSLVAFLLIQPLNRLTIELSFVALFLAASYPFTKRFFAMPQAYLGIAFSFGIPMAFAAQTGEVPFPAWFLMG-ANLLWVIAYDTEYAMVDKVDDLRIGIKTSAITFG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_VESOH (4-hydroxybenzoate octaprenyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=ubiA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28
Identity = 67/193 (34.72%), Postives = 103/193 (53.37%), Query Frame = 1
Query:  298 RLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            RLD PIG +LL WP +W++ +A+    FPD K++              C +ND  DR ID +VERT+ RPI SG +                       N  +  L   ++LL   YP  KR+T++PQ  LGL F    L+ ++A    + +   + ++ + V WT++YDT+YA  D+E+DLK+G+KS+A+ F
Sbjct:    2 RLDNPIGIYLLLWPTLWALFLASEG--FPDLKLLLIFVLGVVLMRSAGCVINDYADRYIDKLVERTKHRPITSGEIHHRSALKFFVLLIMLAFLLVLLTNWLTIQLAMIAVLLAILYPFTKRWTYFPQFVLGLAFAMSVLMAFSATLNEIPITAWY-VFAATVIWTVIYDTMYAMADREEDLKIGIKSSAILF 191          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURM1 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ubiA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28
Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++   + + M I+ VFW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASD-GH-PRWPLIVIFALGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVGLSFVAFLLILPLNTLTKELSVVALFVAGTYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQNTVP-PLAWVMLIANVFWSIAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANC5 (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.398e-28
Identity = 70/205 (34.15%), Postives = 104/205 (50.73%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P++   Y KL R D+PIG+ LL WP  W++ +AA     P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +  L    + L  SYP +KR T  PQ YLG+ F WG  + +AAV+G + L + + +Y + + W   YDT YA  D++DD+++G KSTA+ FG
Sbjct:   18 PQRLGQYWKLVRGDRPIGSLLLLWPTWWALWLAADG--LPPLWTLLVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLTLNWLTVALSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMAFAAVQGRVPL-LGWLLYAANILWATAYDTWYAMVDRDDDIRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PECCP (4-hydroxybenzoate octaprenyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            AY +L R+DKPIG+ LL WP +W++ +A   G  P    +              C +ND  DR  D  V+RT  RP+ SG ++                      N  +  L  + L L + YP MKR +  PQ  LG  F W   + +AAV  SL  A  + M+++ + WT+ YDT YA  D++DDLK+GVKSTA+ FG
Sbjct:   12 AYCRLMRIDKPIGSLLLLWPTLWALWLAG--GGAPAPWTLFVFVAGVFLMRAAGCVINDYADRHFDGHVKRTASRPLPSGEVSEQSAKVLFVVLVLLAFGLVLTLNTMTIWLSVAGLGLAWVYPFMKRVSHLPQFVLGAAFGWSIPMAYAAVSESLP-ATCWMMFLAYICWTVAYDTQYAMVDRDDDLKIGVKSTAILFG 208          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_HAEDU (4-hydroxybenzoate octaprenyltransferase OS=Haemophilus ducreyi GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 69/196 (35.20%), Postives = 100/196 (51.02%), Query Frame = 1
Query:  289 KLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            +L R DKPIGT LL  P +W++  AA  G  P   ++              C +ND  DR ID  V+RT  RP+A+G +T                      N ++ +L   ++ L   YP MKRFT  PQ  LG+ F W   + + AV   L L   + ++++ + WT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:    2 QLMRFDKPIGTLLLLHPTLWALFAAA--GGIPSSSILIIFILGVIVMRAAGCVINDYADRHIDGKVKRTSQRPLATGRVTTVEAKVLFFVLLIIAFLLDLSLNQYAFLLSFVAVALAVIYPFMKRFTHLPQVVLGMAFGWAIPMAYGAVIEDLPLTC-WLLFLANILWTVAYDTQYAMVDRDDDLRIGVKSTAILF 194          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_DECAR (4-hydroxybenzoate octaprenyltransferase OS=Dechloromonas aromatica (strain RCB) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.090e-28
Identity = 73/207 (35.27%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRI-LGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L  +   Y KL RLDKPIG  LL WP +W++ ++A     P++ ++              C +ND  DRD D  VERT+ RP+ +G +T                       N   I L   ++ L  SYP  KRF   PQAYLG+ F +G  + +AA  G +  A  + + ++ VFW + YDT YA  D++DDLK+G+K++A+ FG
Sbjct:    6 LKERINLYEKLMRLDKPIGILLLLWPTLWALWLSALGR--PNWIVVWIFILGTVLMRSAGCVINDYADRDFDKHVERTKERPLTAGKVTTKEALALFAGLSLLSFLLVVFLGNTLVIWLSLPAVFLAASYPFTKRFFAIPQAYLGVAFGFGIPMAYAAHLGEVP-AEAWWLLLANVFWAVAYDTEYAMVDRDDDLKIGIKTSAITFG 209          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURXL (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia xenovorans (strain LB400) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.342e-28
Identity = 66/199 (33.17%), Postives = 105/199 (52.76%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+     P   ++              C +ND  DRD D  V RT  RPI SG +                       N  ++ L  ++L +  SYP  KRF   PQAYLG+ F +G  + +AA++  + + + + M ++ VFW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASDGR--PSLPLLVIFTVGTVLMRSAGCAINDYADRDFDRYVRRTENRPITSGKIRAWEAVALAAALSLLAFLLILPLNALTKELSVAALFVAGSYPFTKRFFAIPQAYLGIAFGFGIPMAFAAIQNHVPM-LAWVMLLANVFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURCH (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.342e-28
Identity = 66/199 (33.17%), Postives = 108/199 (54.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+     P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M ++ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASDGR--PRWPLLVIFTLGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVGLSFIAFLLILPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-LAWVMLVANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_XANOM1.406e-2833.654-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_NITMU1.406e-2836.684-hydroxybenzoate octaprenyltransferase OS=Nitroso... [more]
UBIA_VESOH1.836e-2834.724-hydroxybenzoate octaprenyltransferase OS=Vesicom... [more]
UBIA_BURM11.836e-2834.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_XANC52.398e-2834.154-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_PECCP3.132e-2836.004-hydroxybenzoate octaprenyltransferase OS=Pectoba... [more]
UBIA_HAEDU3.132e-2835.204-hydroxybenzoate octaprenyltransferase OS=Haemoph... [more]
UBIA_DECAR4.090e-2835.274-hydroxybenzoate octaprenyltransferase OS=Dechlor... [more]
UBIA_BURXL5.342e-2833.174-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURCH5.342e-2833.174-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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