FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURCC (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.342e-28
Identity = 66/199 (33.17%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+     P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M ++ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASDGR--PRWPLLVIFTLGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVGLSFIAFLLILPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-LAWVMLVANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURCA (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=ubiA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.342e-28
Identity = 66/199 (33.17%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+     P + ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   +L +  SYP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M ++ +FW++ YDT YA  D++DD+K+G++++AL FG
Sbjct:    8 YLRLVRMDKPIGSLLLLWPTLNALWIASDGR--PRWPLLVIFTLGTLLMRSAGCAMNDYADRDFDRHVKRTADRPLTSGKIRAWEAVAIAVGLSFIAFLLILPLNTLTKELSVVALFVAGSYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-LAWVMLVANIFWSVAYDTEYAMVDRDDDIKIGIRTSALTFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEHT (4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ubiA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 70/205 (34.15%), Postives = 99/205 (48.29%), Query Frame = 1 
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P     Y  L R+DKPIGT LL WP  W++ +A      P                   C +ND  DR ID  V+RT  RP+ SG ++                      +  + +L   +L L F YP MKR+T  PQ  LG  F W   + + A   +L +   + ++I+ + WT+ YDT+YA  D++DDLK+GVKSTA+ FG
Sbjct:    8 PSHIPYYIALMRIDKPIGTLLLLWPTYWALWLAN--AGMPSLTNFIVFTLGVVIMRSAGCVINDFADRKIDGSVKRTMQRPLVSGQVSSGEAISLFILLITVAFLLVLMLSVNTILLSFGALALAFCYPFMKRYTQLPQVVLGAAFGWAIPMAFMASINALPIQA-WLLFIANICWTVAYDTMYAMVDRDDDLKIGVKSTAILFG 209
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURPS (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia pseudomallei GN=ubiA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVVIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURP6 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia pseudomallei (strain 668) GN=ubiA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVAIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURP1 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=ubiA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVVIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURP0 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=ubiA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVAIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURMA (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia mallei GN=ubiA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVVIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_BURM7 (4-hydroxybenzoate octaprenyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=ubiA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L R+DKPIG+ LL WP + ++ +A+  GH P   ++              C +ND  DRD D  V+RT  RP+ SG +                       N  ++ L   ++ +  +YP MKRF   PQAYLG+ F +G  + +AAV+ ++ + + + M  + VFW++ YDT YA  D++DDLK+G++++A+ FG
Sbjct:    8 YLRLIRMDKPIGSLLLLWPTLNALWIASD-GH-PAPSLVVIFALGTLLMRSAGCAINDYADRDFDRHVKRTAERPLTSGKIRAWEAIAIAVGLALVSFLLILPLNGLTKELSVVAVFVAATYPFMKRFFAIPQAYLGIAFGFGIPMAFAAVQDTVPM-IAWAMLAANVFWSVAYDTAYAMVDRDDDLKIGMRTSAITFG 203
[Close]
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_FRAP2 (4-hydroxybenzoate octaprenyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=ubiA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.554e-27
Identity = 69/202 (34.16%), Postives = 103/202 (50.99%), Query Frame = 1 
Query:  277 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGD 882
            +AY  L RL +PI   L+ WP + ++ +A+     PD K +              C VND+ D D D  VERT  RP+ SG L+                      N ++ +L   +L L   YP  KRF   PQ  LGL FN+G  + ++A++  + L   +  Y+S + WT+ YDTIYA  D++ DL++G+KS+A+ FGD
Sbjct:    8 KAYIMLMRLHRPIPILLILWPTLTALVLASHG--IPDIKYLIVFTIGVVVMRTVGCIVNDIADIDFDKYVERTNTRPLTSGKLSVKNALYLCLALTIIAFICVLFLNLYTILLSFVALFLAVLYPFCKRFFAIPQLILGLAFNFGIFMAFSAIENQIPLEA-WIFYLSTICWTIAYDTIYALADRDFDLEIGIKSSAVLFGD 206
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_BURCC5.342e-2833.174-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURCA5.342e-2833.174-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_PSEHT6.977e-2834.154-hydroxybenzoate octaprenyltransferase OS=Pseudoa... [more]
UBIA_BURPS6.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURP66.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURP16.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURP06.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURMA6.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_BURM76.977e-2833.674-hydroxybenzoate octaprenyltransferase OS=Burkhol... [more]
UBIA_FRAP21.554e-2734.164-hydroxybenzoate octaprenyltransferase OS=Francis... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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