FC877895

Overview
NameFC877895
Unique NameFC877895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length884
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:17..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 62/139 (44.60%), Postives = 94/139 (67.63%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            YA+AL  A+ FF+ Q+SGKL ++ ++ WR DSAL DG+   ++L  G YDAGD++KFG+PMAF+ ++LSWA +EY  ++  V+QL   Q +++W  D+++ AH     L  QVG  + DH CWERPE M   R + +++
Sbjct:   41 YADALAKAILFFEGQRSGKLPSSQRVKWREDSALSDGKLQNVNLMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQSAIRWGADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKID 179          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 60/139 (43.17%), Postives = 88/139 (63.31%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL+ ++ +F+ Q+SG+L  + +++WRG S L DG   G+DL  G YDAGDH+KFG PMAFT T+LSW  +++   +    + + A +++KW TDY + AH    V   +VG  D DH CW+RPE M   R   +V+
Sbjct:   56 YREALEKSLLYFEAQRSGRLPYSQRVTWRGHSGLTDGLQQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRVD 194          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.406e-30
Identity = 62/139 (44.60%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL   + +F+ Q+SG L  N ++ WRG S L DG   G+DL  G YDAGD++KFG PMAFT T+LSWA  E+ D++    + +   +++KW TDYL+ AH   + L  +VG  D DH CW+RPE M   R   +V+
Sbjct:   37 YKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVD 175          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDV--------------VDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQV 878
            YA+AL  A+ FF+ Q+SGKL    +++WR DS L DG   G+DL  G YDAGD++KFG PMAFT T+LSW+++E+GD M                V QL  A+ +++W  DYL+ +A    + L VQV  P +DH+CWERPE M   R + +V
Sbjct:   25 YADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWERPEDMDTPRSVYKV 177          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            YA+AL  ++ FF  Q+SG+L  ++ + WR +S L DG    +DLT G YD GD++KFGFPMAFT T+LSW ++EYG +M     L+ A+D+++W  DYL+ +A     VL V VG PD DH+CWERPE M   R +  V+
Sbjct:   42 YADALAKSILFFQGQRSGRLPPDQAVKWRSNSGLSDGSAANVDLTGGYYDGGDNVKFGFPMAFTTTMLSWGVVEYGGRMR-GRVLRDARDAVRWAADYLLRAATATPGVLYVGVGDPDADHRCWERPEDMDTPRAVYSVS 180          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.342e-30
Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SG+L  + ++ WR DS L DG    +DLT G YDAGD++KFGFPMAFTAT++SW ++++G         + A+ +++W TDYL+ A  K N + VQVG   +DH CWERPE M   R + +V+
Sbjct:   37 YGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFG--PHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVD 173          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.342e-30
Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLIS-AHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL  ++ FF  Q+SG+L +++ +SWR  S L DG    +DLT G YDAGD++KF FPMAFT T+LSW+ LEYG +M    +LQ ++ +++W TDYL+  A      L V VG P+ DHKCWERPE M   R +  V+
Sbjct:   25 YREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMG--PELQNSRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVS 162          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGRD--------------------------MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKE---NVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y  AL +++ +F+ Q+SG+L    ++ WR DSAL DG D                          M +DLT G YD+GD++KFGFPMAFT   LSW+++EYGD++D   +L  A D+++W  DYL  AH        L VQVG  D DH CW+RPE+M   R    VN
Sbjct:   25 YRAALAMSLLYFEGQRSGRLPPAQRVQWRADSALADGADHRVPDLASPPSSNVSVCARTDAMQCDMQVDLTGGYYDSGDNVKFGFPMAFTVAALSWSVVEYGDRLDAAGELGHALDAVRWGADYLTRAHASAGGGEALYVQVGDGDSDHSCWQRPENMDTPRTAYMVN 192          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUNI_CLOTH (Endoglucanase 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celI PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN--KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL+ A+ F++ Q+SGKL  +  +++WRGDS L DG+D G+DLT G YDAGDH+KF  PM+++A +L WA+ EY D      Q     +++KW  DY I  HP+++V   QVG    DH  W   E M   RP  +V+
Sbjct:   78 YGEALQKAIFFYECQRSGKLDPSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVD 217          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 68/140 (48.57%), Postives = 88/140 (62.86%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLIS-AHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL  ++ FF  Q+SG L   + ISWR  S L DG    +DLT G YDAGD++KF  PMAFT T+LSW+ LEYG +M    +L+ A+ +++W TDYL+  A      L V VG P+ DHKCWERPE M   R +  V+
Sbjct:   25 YKEALSKSLLFFQGQRSGPLPRGQQISWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKRMG--PELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVS 162          
The following BLAST results are available for this feature:
BLAST of FC877895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN_PHAVU1.406e-3044.60Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN22_ORYSJ1.406e-3043.17Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN21_ORYSJ1.406e-3044.60Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUN4_ORYSJ4.090e-3045.10Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN11_ORYSJ4.090e-3047.86Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUN6_ORYSJ5.342e-3045.32Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN3_ARATH5.342e-3048.57Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN14_ORYSJ2.030e-2941.07Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]
GUNI_CLOTH3.462e-2944.29Endoglucanase 1 OS=Clostridium thermocellum (strai... [more]
GUN9_ARATH7.713e-2948.57Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CE06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877895 ID=FC877895; Name=FC877895; organism=Citrus clementina; type=EST; length=884bp
AAAATAAAATAACGAATAAACCCGCGTGACTGACCTCTGTCGGTGATCAA
AGAAATTAAAGAAAATTGACGATCTGATTTGTCCCAGACCCAGCTGCTTC
AATTGTATTGTATTAGAGAATTTGCAAAACTGATTCAGCAGCCAAATTAA
GCTTCTTACCACTCACATTTCACCCACTAGAGAGAAATACGGTGCTGCGT
TTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCACCCA
ATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATTGTG
TTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTCTTG
GTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTATTAA
AAAGAAAACAAGTCACTCTGATAAGCCGGCTCCAGTTCCCGGTCCCCCCG
GCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAGTTC
TTCGACGTACAAAAATCGGGAAAGTTGGTGAATAATAAGATATCATGGAG
AGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCACAA
AAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATGGCT
TTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCAGAT
GGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGATCA
CTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTTCAG
GTGGGGCATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAGCAT
GGCTGAAGGGAGACCACTCACTCAGGTCAACACA
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