FC877896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_NEUCR (Branchpoint-bridging protein OS=Neurospora crassa GN=bpb-1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 45/129 (34.88%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 526 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLN---EPLHILVEAELPVEIVDARLMQAREILEDLLK---PVDESHDFYKKQQLRELAMLNGTLREE 894 +V +PV YP NF+G L+GPRGN+LK++E + ++ IRG+GS+K+ +G+ H + E LH L+ A+ + ++ +A++++ ++++ + E + K+ QLRELA LNGTLR++ Sbjct: 199 KVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG------KGRSDAAHSSNQEEDLHCLIMAD-----TEEKVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGTLRDD 316
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_YARLI (Branchpoint-bridging protein OS=Yarrowia lipolytica GN=BBP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.358e-15 Identity = 53/132 (40.15%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 529 VDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD-PAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAMLNGTLREE----GSPMS 909 V IPV +YP+ NF+G+LLG RG +LK++E + ++ IRGRGS+K R ++ P + LH L+ +E +I AR +Q + + D V E + K+ QLRELA LNGTLR++ G+P S Sbjct: 183 VYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTDI----PFQSTAEDDLHCLIISEDEEKI--ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRDDENYGGAPQS 308
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_DEBHA (Branchpoint-bridging protein OS=Debaryomyces hansenii GN=BBP PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.773e-15 Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 511 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIK-----------DPAREEMMRGKPGYEHL-NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAMLNGTLRE 891 VK ++ IPV+ YP+ NFVG LLGPRGN+L++++ + R+ IRG+GS+K D + + P N+ LH+++ ++ +I A + + I + + PV ++ K+ QLRELA+LNGTLRE Sbjct: 160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNNDDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKAIKLTNQVIEKAISSPVGQND--LKRGQLRELAILNGTLRE 296
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_SCHPO (Branchpoint-bridging protein OS=Schizosaccharomyces pombe GN=bpb1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.159e-15 Identity = 47/127 (37.01%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 526 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYE-HLNEPLHILVEAELPVEIVDARLMQAREILEDLLK---PVDESHDFYKKQQLRELAMLNGTLREE 894 +V +PV+ YP NF+G L+GPRG++LK +EA + ++ IRG+GS+K E R P ++ E LH LV A+ + ++ A ++++++++ V E + K+ QLR+LA LNGTLR++ Sbjct: 189 KVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK----EGKGRSDPSVRGNMEEDLHCLVTAD-----SEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRDD 306
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_CRYNE (Branchpoint-bridging protein OS=Cryptococcus neoformans GN=BBP PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.729e-14 Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 526 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY--EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAMLNGTLREE 894 +V IPV+++P NF G L+GPRGNSLK++E + ++ IRG+GS+K+ +G+ G + + LH L+ A+ V + +++E + +D +K+ QLRELA LNGTLR++ Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFPQDEEDELHCLITAD-DESKVKTCVALINKVIETAASTPEGEND-HKRNQLRELASLNGTLRDD 365
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: BBP_USTMA (Branchpoint-bridging protein OS=Ustilago maydis GN=BBP PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.829e-13 Identity = 42/125 (33.60%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 520 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLRELAMLNGTLREE 894 T +V +P++++P F G L+GPRGN+LK +E + ++ IRG+GS+K +GK + E +H +V A+ + + +++E + +D +K+ QLRELA LNGTLR++ Sbjct: 249 TEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKTG------KGKMDADEDEEEMHCVVTADDEASVKKC-IKLINQVIETAASTPEGEND-HKRNQLRELAALNGTLRDD 365
BLAST of FC877896 vs. ExPASy Swiss-Prot
Match: GRP33_ARTSA (Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 511 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPLHI-LVEAELPVEIVDARLMQAREILEDLLKPVDE 825 VK R +PV+++P +NF+G+LLGP G+++K+++ T ++ I GRGS++D +EE +R G Y HLNE LHI ++ P E AR+ A ++ + P ++ Sbjct: 72 VKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAE-AHARMAYALTEIKKYITPEED 178 The following BLAST results are available for this feature:
BLAST of FC877896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877896 ID=FC877896; Name=FC877896; organism=Citrus clementina; type=EST; length=923bpback to top |