FC877900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_DICDI (Nuclear transcription factor Y subunit beta OS=Dictyostelium discoideum GN=nfyB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.011e-38 Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 1 Query: 82 GGS--HESGGEQSPHAG-GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME--GDTKGSARGGDGSA 453 GGS + SGG + + G REQDRYLPIANI RIMKKALP N K+AKDAK+TVQ+CVSEFISFITSEASDKCQ+EKRKTING+D++ AM +LGFE+Y++PLK YL++YRE E + K S + + S+ Sbjct: 27 GGSSNNNSGGNANNNNNEGDREQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNNKRSPKKSESSS 155
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38 Identity = 88/174 (50.57%), Postives = 121/174 (69.54%), Query Frame = 1 Query: 49 SEMAEAPTSPAGGSH-ESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGDTKGSARGGDGSAKRDTIGALPGQNAQYALQGPL--NYVNPQAQGQHMIV 558 S +A S A G H ES G + P+ REQD YLPIAN++RIMK ++P++GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL +YRE M+G+ G + T A+P + + + GPL + + Q Q+++V Sbjct: 29 SSDGDAEGSLASGDHDESCGSKDPY----REQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYRESMKGEK------GINATVVTTTDAIPEELTEESFSGPLATSIITADGQQQNVMV 192
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB5_ARATH (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.341e-36 Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 70 TSPAGGSHESGG-------EQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKG-SARGGDGSA 453 +S + HE G +Q + V+EQDR LPIAN+ RIMK LPAN K++K+AK+T+QECVSEFISF+T EASDKC KEKRKT+NGDD+ WAMA LGF+DY LK YL RYR +EG+ +GG S+ Sbjct: 22 SSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSS 157
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_CHICK (Nuclear transcription factor Y subunit beta OS=Gallus gallus GN=NFYB PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35 Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIV 558 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ GDG ++ T A + Q P + Q Q+++V Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGTVTTGDGLSEELTEEA-------FTNQLPAGLITTDGQQQNVMV 188
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 97 SGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALP-GQNAQYALQGPL 516 +GGE+ VREQDR++PIAN+ RIM++ LPA+ KI+ D+K+T+QECVSE+ISFIT EA+++CQ+E+RKTI +D+LWAM+ LGF+DYI+PL YL RYRE+EG+ S G S + P G +Y GP+ Sbjct: 48 NGGEEECT---VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYGAYGPV 185
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_HORSE (Nuclear transcription factor Y subunit beta OS=Equus caballus GN=NFYB PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.908e-35 Identity = 85/171 (49.71%), Postives = 114/171 (66.67%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGDTKGSARGGDGSAKRDTIGALPGQNAQYAL--QGPLNYVNPQAQGQHMIVPSMQGNE*VVSSFTVTYFMILGLLKL 636 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G G A T G L + A+ A Q P + Q Q+++V +T +Y I G+ ++ Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK------GIGGAVTATDG-LSEELAEEAFTNQLPAGLITADGQQQNVMV------------YTTSYHQISGVQQI 204
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIV 558 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A + Q P + Q Q+++V Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEA-------FTNQLPAGLITADGQQQNVMV 190
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_MOUSE (Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIV 558 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A + Q P + Q Q+++V Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEA-------FTNQLPAGLITADGQQQNVMV 190
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_HUMAN (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIV 558 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T A + Q P + Q Q+++V Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELTEEA-------FTNQLPAGLITTDGQQQNVMV 190
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_BOVIN (Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIV 558 REQD YLPIAN++RIMK A+P GKIAKDAK+ VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ DG ++ T + + Q P + Q Q+++V Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELT-------DEAFTNQLPAGLITADGQQQNVMV 190 The following BLAST results are available for this feature:
BLAST of FC877900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877900 ID=FC877900; Name=FC877900; organism=Citrus clementina; type=EST; length=792bpback to top |