FC877900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB9_ARATH (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana GN=NFYB9 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.005e-34 Identity = 65/113 (57.52%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIG 471 REQD+Y+PIAN+ RIM+K LP++ KI+ DAK+T+QECVSE+ISF+T EA+++CQ+E+RKTI +D+LWAM+ LGF++Y+DPL ++ RYRE+E D +GSA G+ + R T G Sbjct: 28 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETD-RGSALRGEPPSLRQTYG 139
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB4_ARATH (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana GN=NFYB4 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.468e-29 Identity = 56/105 (53.33%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 136 EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGS 450 ++DR LPIAN+ R+MK+ LP+N KI+K+AK TVQEC +EFISF+T EAS+KC +E RKT+NGDD+ WA++TLG ++Y D + +L +YRE E + +G + S Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSNDS 107
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: HAP3_YEAST (Transcriptional activator HAP3 OS=Saccharomyces cerevisiae GN=HAP3 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 49 SEMAEAPTSPAGGSHESGGEQSPHAG-----GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME 411 +E TSP + E+GG S +REQDR+LPI N++R+MK LP + K++KDAK+ +QECVSE ISF+TSEASD+C +KRKTING+D+L ++ LGFE+Y + LK YL +YR+ + Sbjct: 4 NESEHVSTSPED-TQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQ 128
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: HAP3_KLULA (Transcriptional activator HAP3 OS=Kluyveromyces lactis GN=HAP3 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.724e-27 Identity = 55/92 (59.78%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 136 EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME 411 EQDR+LPI N++R+MK LPA K++KDAK+ +QECVSEFISF+TSEA D+C KRKTING+D+L ++ LGFE+Y + LK YL +YR+ + Sbjct: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQ 113
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: HAP3_SCHPO (Transcriptional activator hap3 OS=Schizosaccharomyces pombe GN=hap3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26 Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 1 Query: 151 LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME 411 LPIAN++RIMK ALP N KI+K+AKD VQ+CVSEFISF+T EAS++C +EKRKTI G+D+L A+ TLGFE+Y + LK L +YRE + Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDVLLALNTLGFENYAEVLKISLTKYREQQ 98
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_XENLA (Nuclear transcription factor Y subunit beta (Fragment) OS=Xenopus laevis GN=nfyb PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.470e-20 Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 232 VQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYRE-MEGD--TKGSARGGDG 447 VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL ++RE M+G+ G+ GDG Sbjct: 1 VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGTVTTGDG 75
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB1_ORYSJ (Nuclear transcription factor Y subunit B-1 OS=Oryza sativa subsp. japonica GN=NFYB1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.295e-16 Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 151 LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREME 411 LP+AN+ R++KK LP KI AK +C EF+ F+ EAS+K + E R+T+ +D L + LGF+ Y+DP+ AY+ YRE E Sbjct: 34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYREFE 120
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NC2B_ARATH (Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14 Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 127 GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPL-KAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQ----NAQYALQGPLNYVNPQ 534 G ++D LP A +++I+K+ LP + ++A+DA+D + EC EFI+ ++SE++D C KE ++TI + +L A+ LGF +YI+ + AY E DT+ S + G+ + A Q A+ + G ++ P+ Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEEAAAEQQRMFAEARARMNGGVSVPQPE 148
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: DPOE3_RAT (DNA polymerase epsilon subunit 3 OS=Rattus norvegicus GN=Pole3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12 Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRY-REMEGDTKGSARGGDGSAKRD 462 R +D LP A I+RI+K+ALP I+K+A+ + S F+ + TS A++ K KRKT+N D+L AM + F+ ++ PLK L Y RE +G + S + K+D Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKD 114
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: DPOE3_MOUSE (DNA polymerase epsilon subunit 3 OS=Mus musculus GN=Pole3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.475e-12 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 133 REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAK 456 R +D LP A I+RI+K+ALP I+K+A+ + S F+ + TS A++ K KRKT+N D+L AM + F+ +I PLK L YR D KG + K Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFITPLKEALEAYRR---DEKGKKEASEQKKK 108 The following BLAST results are available for this feature:
BLAST of FC877900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877900 ID=FC877900; Name=FC877900; organism=Citrus clementina; type=EST; length=792bpback to top |