FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_METCA (ATP-dependent Clp protease proteolytic subunit 2 OS=Methylococcus capsulatus GN=clpP2 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 R++++ + + LV+A+L++L+ +P I+LYINS G G+ + G AIYDT+ +K +V T+ VG A M LLLA G GKR+ +PH++IMI QP G ASD+ I A+E + RD L K+L Sbjct: 25 RVIFLVGQVEDYMANLVIAQLLFLESENPDKDIHLYINSPG---------GLVTAGLAIYDTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIHQPLGGFQG--QASDIDIHAREILAVRDRLNKIL 151
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_METCA (ATP-dependent Clp protease proteolytic subunit 1 OS=Methylococcus capsulatus GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 R++++ + + LV+A+L++L+ +P I+LYINS G G+ + G AIYDT+ +K +V T+ VG A M LLLA G GKR+ +PH++IMI QP G ASD+ I A+E + RD L K+L Sbjct: 36 RVIFLVGQVEDYMANLVIAQLLFLESENPDKDIHLYINSPG---------GLVTAGLAIYDTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIHQPLGGFQG--QASDIDIHAREILAVRDRLNKIL 162
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_STAS1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+ +G + V +V++L++LQ D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A + R L ++L Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAANHILKTRAKLNQIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSW (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp. (strain WCH70) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+ +G P+ V +V++L++L DP+ I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP + G A+++ I AK + RD L ++L Sbjct: 28 RIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQG--QATEIEIAAKRILFLRDKLNRIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G + V + ++++L+ L DPK I L+INS G G S AIYD + ++ +V T+A+G A A ++L AGTKGKRF MP+ +IMI QP +SG A DV I+AKE M N++ + ++ Sbjct: 88 RIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG---------GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASG--QAIDVEIQAKEVMHNKNNVTSII 214
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + AV + +VA++++L+ DP+ I +Y+NS G G + G AIYDT+ Q+ +V T+ G A M LL+ GTKGKR +P+A+IMI QP + G A D+ I+AKE + ++TL LL Sbjct: 33 RIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPG---------GSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQG--QAVDIEIQAKEILFLKETLNGLL 159
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + +VA++++L+ DP+ IYLYINS G G +G I+DT+ +K +V TV VG A M LL AGTKGKR + H++IMI QP +SG ASD+ I+A E + +D L Sbjct: 26 RIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASG--QASDIRIQADEILYLKDRL 148
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_CHLFF (ATP-dependent Clp protease proteolytic subunit 1 OS=Chlamydophila felis (strain Fe/C-56) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS-DVLIRAKEAMVNRDTLVKLL 818 RIV IG + + V+A+L++L DP+ I ++INS G G + G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS G++ S D+ ++A E + + L +L Sbjct: 28 RIVMIGQEITEPLANTVIAQLLFLMSEDPQKDIKVFINSPG---------GYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PSGGIIGTSADIQLQAAEILTLKKHLANIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + LVVA+L++L+ DP IYLYINS G G + G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++IMI QP G A+D+ I A + +D L +L Sbjct: 28 RIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG---------GSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQG--QATDIGIHANRILKIKDKLNSIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKL 815 RI+++G + + +VA ++YL DP I LYINS G G + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G A+D+ I A+E + R L +L Sbjct: 31 RIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPG---------GSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRG--QATDIEIEAREILRVRRQLNEL 156 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |