FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNPX (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain WH8102) GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + +VA++++L+ DP+ IYLYINS G G +G I+DT+ +K +VHTV VG A M LL AGTKGKR + H++IMI QP + G ASD+ I+A E + ++ L Sbjct: 26 RIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGARG--QASDIRIQADEILYLKERL 148
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + AV + +VA++++L+ DP+ I +YINS G G + G AIYDT+ Q+ +V T+ G A M LL+ GTKGKR +P+A+IMI QP + G A D+ I+AKE + ++TL L+ Sbjct: 33 RIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPG---------GSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQG--QAVDIEIQAKEILYLKETLNGLM 159
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNP6 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G P+ V +VA+L++L+ DP+ IYLYINS G G +G I+DT+ ++ +V TV VG A M LLAAG KGKR + H++IMI QP + G A D+ I+A E + + L ++L Sbjct: 26 RIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQG--QAKDIEIQANEILYIKQNLNEVL 152
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNE7 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G P+ V +VA+L++L+ DP+ IYLYINS G G +G I+DT+ ++ +V TV VG A M LLAAG KGKR + H++IMI QP + G A D+ I+A E + + L ++L Sbjct: 26 RIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQG--QAKDIEIQANEILYIKQNLNEVL 152
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 55/138 (39.86%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+ +G + V +VA+L++LQ DP I LYINS G G + G AIYDT+ +K V T+ +G A M LLAAG KGKRF +P++++MI QP + G ASD+ I + + R+TL ++L Sbjct: 28 RIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG---------GSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRG--QASDIEIHTRRILEMRETLNRIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_DECAR (ATP-dependent Clp protease proteolytic subunit OS=Dechloromonas aromatica (strain RCB) GN=clpP PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 R++++ P+ LVVA+L++L+ +P IY YINS G G + G +IYDT+ +K +V T+ +G A M LL AG KGKRF +P++++MI QP G ASD+ I AKE + RD L +++ Sbjct: 41 RVIFLVGPVNDVTANLVVAQLLFLEAENPDKDIYFYINSPG---------GSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQG--QASDIAIHAKEILSIRDRLNRIM 167
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP5_STRAW (ATP-dependent Clp protease proteolytic subunit 5 OS=Streptomyces avermitilis GN=clpP5 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G P+ V+A+ M+L+ + P I LYINS G G S A+YDT+ + C+V T+ +G A A +LLA GT GKR +P A+++I QP LP+ ASD++I+A E R+ L +LL Sbjct: 34 RIVFLGTPIDDTSANDVMAQFMHLEHLAPDRDISLYINSPG---------GSFSAMTAVYDTMQFVSCDVETICLGQAASAAAVLLAGGTPGKRLALPGARVLIHQPSLPAPVQGQASDLVIQAAELARTREQLEELL 162
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP4_FRASC (ATP-dependent Clp protease proteolytic subunit 4 OS=Frankia sp. (strain CcI3) GN=clpP4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RIV++G + AV + A+L+ L DP A IYLYINS G G S G AIYDT+ + +V TVA+G A M LL AGT GKR+ +PHA+IM+ QP G A+D+ I+A++ + + TL Sbjct: 43 RIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYINSPG---------GSVSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQPHGGIGG--TAADISIQAEQMLYTKRTL 165
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV +G + V ++VA+L++L+ DP I LYINS G G + G AIYDT+ +KC V T+ VG A M +LL AG KGKR+ +P ++IMI QP G A+D+ I+AKE + + L +L+ Sbjct: 30 RIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG---------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRG--QATDIEIQAKEILRMKAKLNELI 156
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLTR (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia trachomatis GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS-DVLIRAKEAMVNRDTLVKLL 818 RIV IG + + V+A+L++L DP I ++INS G G + G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS G++ S D+ ++A E + + L +L Sbjct: 28 RIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------GYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PSGGIIGTSADIQLQAAEILTLKKHLSNIL 154 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |