FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLTA (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS-DVLIRAKEAMVNRDTLVKLL 818 RIV IG + + V+A+L++L DP I ++INS G G + G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS G++ S D+ ++A E + + L +L Sbjct: 28 RIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------GYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PSGGIIGTSADIQLQAAEILTLKKHLSNIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLMU (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia muridarum GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS-DVLIRAKEAMVNRDTLVKLL 818 RIV IG + + V+A+L++L DP I ++INS G G + G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS G++ S D+ ++A E + + L +L Sbjct: 28 RIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------GYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PSGGIIGTSADIQLQAAEILTLKKHLSNIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV +G + V ++VA+L++L+ DP I LYINS G G + G AIYDT+ +KC V T+ VG A M +LL AG KGKR+ +P ++IMI QP G A+D+ I+AKE + + L +L+ Sbjct: 30 RIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG---------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRG--QATDIEIQAKEILRMKAKLNELI 156
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + + L+VA+L++L DP+ IYLYINS G G + G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP + G A+D+ I+A+E + ++ L Sbjct: 27 RIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------GSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQG--QATDIEIQAREILYHKRRL 149
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_WOLTR (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 50/128 (39.06%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAM 788 RI+++ P+ + ++VA+L++L+ +P IY+YINS G G+ + G +IYDT+ +K +V T+ +G A M LLLAAGT+GKR+ +PH++IMI QP G A+D+ I A E + Sbjct: 28 RIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPG---------GVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQG--QATDIEIHANEIL 144
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_VESOH (ATP-dependent Clp protease proteolytic subunit OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++ P+ + +VVA+L++L+ +P I+LYINS G G S G AIYDT+ +K ++ T+ +G A M LLL AGTKGKRF +P+ + MI QP SG ASDV I A+E + R L Sbjct: 33 RIIFLVGPIEDYMANVVVAQLLFLESENPDKDIHLYINSPG---------GSVSAGLAIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFALPNVRCMIHQPLGGFSG--QASDVDIHAQEILKVRANL 155
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_NITMU (ATP-dependent Clp protease proteolytic subunit OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 53/138 (38.41%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 R++++ P+ A L+VA+L++L+ + I+ YINS G G+ S G A+YDT+ +K +V T+ +G A M LLLAAG KGKRF +P++++MI QP G ASD+ I A+E + ++ L +LL Sbjct: 43 RVIFLVGPVTEASANLIVAQLLFLESENADKDIHFYINSPG---------GLVSAGMAVYDTMQFIKPDVSTLCIGQAASMGSLLLAAGAKGKRFCLPNSRVMIHQPLGGFQG--QASDIEIHAREILYLKNRLNELL 169
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_DESPS (ATP-dependent Clp protease proteolytic subunit OS=Desulfotalea psychrophila GN=clpP PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + V ++VA+L++L+ DP+ I YINS G G + G AIYDT+ +KC++ T+ +G A M +LLAAGT GKR+ +P+++IMI QP G A+D+ I KE + R L +L Sbjct: 28 RIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPG---------GSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQPLGGFQG--QATDIEIHTKEILRIRKDLNNIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_CAMHC (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV + + V VVA+L++L+ DP IYLYINS G G+ + GF+IYDT+ +K V T+ +G A M LL+ G KGKR+ +P+A+IMI QP + G A+D+ I KE + + TL K+L Sbjct: 27 RIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPG---------GVVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRYALPNARIMIHQPLGGAQG--QATDIEITTKEILRIKATLNKIL 153
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_CALS8 (ATP-dependent Clp protease proteolytic subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18 Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV + + + L+VA+L++L+ DP IYLYINS G G + GFAIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+++IMI QP G A+D+ I A+ + + + ++L Sbjct: 29 RIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG---------GSVTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVRG--QATDIKIHAEWILKIKQRINRIL 155 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |