FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 53/128 (41.41%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAM 788 RIV++G P+ V +V+A+L++L+ DP I LYINS G G + G AIYDT+ +K +V T+ +G A M LLA G GKRF +P+A+IMI QP G A+D+ I+A+E + Sbjct: 30 RIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG---------GSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQG--QATDIDIQAREIL 146
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMM (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP3 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G P+ +VA++++L+ DP+ IYLYINS G G +G I+DT+ +K +V TV VG A M LL AG GKR + H++IMI QP + G ASD+ I+A E + +D L ++L Sbjct: 26 RIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQPLGGARG--QASDIRIQADEILFLKDRLNRVL 152
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_TROW8 (ATP-dependent Clp protease proteolytic subunit 2 OS=Tropheryma whipplei (strain TW08/27) GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G+ + A + V+A+L+ L+ D + I +YINS G G + AIYDT+ ++ ++ TV +G A A ++L+AGT GKR +P+A+I+I QP + SSG ASD+ I+A+E M R+ L K L Sbjct: 33 RIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPG---------GSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTL 161
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_TROWT (ATP-dependent Clp protease proteolytic subunit 1 OS=Tropheryma whipplei (strain Twist) GN=clpP1 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18 Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G+ + A + V+A+L+ L+ D + I +YINS G G + AIYDT+ ++ ++ TV +G A A ++L+AGT GKR +P+A+I+I QP + SSG ASD+ I+A+E M R+ L K L Sbjct: 33 RIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPG---------GSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTL 161
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_PROVI (ATP-dependent Clp protease proteolytic subunit OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + V L++A+L++L+ DP I++Y+NS G G S G IYDT+ ++ +V TV VG A M LLA+G KGKR +PH++IMI QP + G SD++I+A+E R L +++ Sbjct: 53 RIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIFIYVNSPG---------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQPSGGAQG--QESDIIIQAREIEKIRRLLEEIM 179
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_JANMA (ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium sp. (strain Marseille) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++ P+ + L+VA+L++L+ +P I LYINS G G S G AIYDT+ +K V T+ G A M LLAAG KGKRF +P+++IMI QP + G ASD+ I+A+E + R+ L +L Sbjct: 44 RIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPG---------GSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQG--QASDIEIQAREILYLRERLNAIL 170
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_HALOH (ATP-dependent Clp protease proteolytic subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 52/138 (37.68%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G P+ ++ L++A+L++L+ DP I+LYINS G G + A+YDT+ +K +V T+ +G A LLLA+GTKGKR+ +P+A++MI QP G A++ I KE + R+ L ++L Sbjct: 28 RIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPG---------GSVTAALAMYDTIQYIKPDVATICMGQAASAGALLLASGTKGKRYALPNARVMIHQPAGGVQG--KATEAEIHIKELLRLRERLNEIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_GEOUR (ATP-dependent Clp protease proteolytic subunit OS=Geobacter uraniireducens (strain Rf4) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 54/138 (39.13%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G + A++ LV+A+L++L+ DP I+LYINS G G+ + G AIYDT+ +K V T+ VG A M LL+ G KGKRF + +++IMI QP G A+D+ I A+E + + L +L+ Sbjct: 27 RIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG---------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIMIHQPLGGFQG--QATDIHIHAQEILRMKKKLNELM 153
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_FRAP2 (ATP-dependent Clp protease proteolytic subunit OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 55/138 (39.86%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++ + LV+A+L++L+ DP IY YINS G GM + G +YDT+ +K +V+T+ +G A M LLLA G KGKR+ +P ++IMI QP G ASD+ I AK + +D L K+L Sbjct: 31 RIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG---------GMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRG--QASDIEIHAKNILRIKDRLNKVL 157
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_DESAA (ATP-dependent Clp protease proteolytic subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + V ++A+L++L+ DP+ I YINS G G + G AIYDT+ +K E+ TV +G A M +LLAAG GKR+ +P+A+I+I QP G ASD+ I+A+E + ++ L ++L Sbjct: 28 RIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPG---------GSVTAGMAIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARILIHQPMGGFQG--QASDIAIQAQEILRMKEALNEIL 154 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |