FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJA (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20 Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL--PASDVLIRAKEAMVNRDTLVKLL 818 RI++IG P+ + +V ++YL DP+ I +YINS G G + G AIYDT+ +K ++ TV VG A M LLAAGTKGKRF +PH++IM+ QP L G++ ASD+ IRA+E + + + +LL Sbjct: 31 RILFIGEPIDDNLANTIVGVMLYLNSQDPQKDIVMYINSPG---------GSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSL---GMIQGQASDIEIRARETLRVKRRMNELL 158
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_WIGBR (ATP-dependent Clp protease proteolytic subunit OS=Wigglesworthia glossinidia brevipalpis GN=clpP PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 52/138 (37.68%), Postives = 86/138 (62.32%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++ + + L++A++++L+ DP+ I+LYINS G G+ + G +IYDT+ +KCEV T+ +G + MA L+LA+G KGKRF +P+A+IMI QP S G A+D+ I E + + +++LL Sbjct: 28 RIIFVTGKIEDYMANLIIAQMIFLESEDPEKDIFLYINSPG---------GVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIMIHQPLGGSQG--QATDIAIHTTEILKIKKCMIELL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + + ++A ++YL DP IYLYINS G GM + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G A+D+ I A+E + R L Sbjct: 31 RIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------GMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRG--QATDIEIEAREILRIRHQL 153
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + + ++A ++YL DP IYLYINS G GM + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G A+D+ I A+E + R L Sbjct: 31 RIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------GMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRG--QATDIEIEAREILRIRHQL 153
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJB (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. GN=clpP1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS-SGLLPASDVLIRAKEAM 788 RI++IG P+ ++ +V ++YL DP+ I +YINS G G + G AIYDT+ +K ++ TV VG A M LLAAGTKGKRF +PH++IM+ QP L + G ASD+ IRA+E + Sbjct: 31 RILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPG---------GSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQG--QASDIEIRARETL 148
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20 Identity = 54/138 (39.13%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + + ++A ++YL DP+ I+LYINS G G S G AIYDT+ ++ +V T+ VG A M LL AG KGKR +PH++IMI QP + G A+D+ I+AKE + +D L ++L Sbjct: 30 RIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPG---------GSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQG--QATDIGIQAKEILYTKDRLNQIL 156
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20 Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + V LV+A++++L+ DP I+LYINS G G S G AI+DT+ ++ +V T+ VG A M LLAAG KGKRF +P+++IMI QP + G A D+ I AK + RD L ++L Sbjct: 29 RIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG---------GSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQG--QAVDIEIHAKRILAIRDNLNRIL 155
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + V LV+A+L++L+ DP I LYINS G G + G AIYDTL ++ +V T+ VG A M LLAAG KGKR+ +P+A+IMI QP + G A+D+ I A+ M +++L K+L Sbjct: 29 RIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG---------GSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQG--QATDIEIHARRIMNMKESLNKIL 155
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_BDEBA (ATP-dependent Clp protease proteolytic subunit OS=Bdellovibrio bacteriovorus GN=clpP PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKL 815 RI+ +G + V ++A++++L+ +P+ PI+LYINS G G S G AIYD + +KC+V T +G A M LLL AGTKG R+ +P+ +IMI QP L GL +D+ I AKE + ++ L ++ Sbjct: 39 RIIILGTAVTDEVANSIIAQMLFLEVDNPEKPIHLYINSPG---------GSVSAGLAIYDFMQFVKCDVATYCMGMAASMGSLLLTAGTKGMRYSLPNTRIMIHQPLLSGGGLSGQVTDIEIHAKELVKTKEKLTRI 167
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXD (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus (strain DK 1622) GN=clpP2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAM 788 RI+ +G P+ V ++VA+L++L+ DP I LYINS G G + G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP + G A+D+ I+AKE + Sbjct: 27 RIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQG--QATDIDIQAKEIL 143 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |