FC877913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL2N_ARATH (RING-H2 finger protein ATL2N OS=Arabidopsis thaliana GN=ATL2N PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.905e-15 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSS 619 LD+ V+D P FVYS K + EC+VCL+EFE+++ RL+PKC H FH +CID W S +TCP+CR+ P + Q E GSS Sbjct: 81 LDQAVLDKIPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRA-----PVQPPFQVIETGSS 165
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL2H_ARATH (RING-H2 finger protein ATL2H OS=Arabidopsis thaliana GN=ATL2H PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 40/79 (50.63%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG 583 LD +I +FP F YS G ECA+CL+EF D++T+RLI C H FH CID W E H TCPVCR L +PG Sbjct: 78 LDPFIIRSFPVFHYSSATKKNHGT---ECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCEL--DPG 151
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGA-------LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 601 LD+ ID P F Y ++ G G +CAVCL EF + + LRL+P C H FH CID WL+S++TCP+CR L S PG + P Sbjct: 108 LDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS-PGFSMENP 198
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 359 VIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSS 619 V+D+ P F +S V + +CAVCL++FE ++ LRL+P C H FH +CID WL S+ TCP+CRS L + + + +GS+ Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSN 179
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLK----VGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCSQPPEPQVISG 730 LD I P F + + K + EC+VCLNEF++DE LR+IP C HVFH +CID WL+ + CP+CR++++ E T D A +P+E P ++ ++ EP ++ G Sbjct: 102 LDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTL-----------------DLISAPSSPRENSPHSR-NRNLEPGLVLG 215
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.240e-15 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 347 LDREVIDTFPTFV----YSDVKTLKVGKG-------ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLA---SEPGETTPQPSELGSSEVDLEAQNDAAV 655 LD VI P F Y + G+G + EC+VCL+EF+D+E LR+IP C H+FH +CID WL+++ CP+CR+ ++ S P + PS + V L +N+ V Sbjct: 99 LDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENEYVV 215
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.240e-15 Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTL---KVGKGAL----ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTP 595 LD VI T P F+YS VGK + +CAVCL EFE+ + +R +P C H FH ECID WL SH CP+CR+ + G TP Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTP 210
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3E_ARATH (Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.613e-14 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 416 KGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQND 646 K LEC VCL+E D + R++P CDH FH ECID+WL+S++TCP+CR + + T P ELG + +D Sbjct: 83 KYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRP---ELGGRDKSFNQNHD 156
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.106e-14 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 568 +D+ ID P Y + L+ +CAVCL EF ++ LRL+PKC H FH ECID WL +++TCP+CR NL Sbjct: 96 IDQSFIDALPLLHYKTMIGLR--HDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.106e-14 Identity = 38/116 (32.76%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG-ETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQA 691 L +++ + P +Y + +K +C+VCL +++ +E L+ +P C H FH ECID WL SHTTCP+CR +L +P + + Q +E+ SS +E N + + ++ +A Sbjct: 87 LSKDIREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSS---IENSNGGEASTQPDSQSATEA 195 The following BLAST results are available for this feature:
BLAST of FC877913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877913 ID=FC877913; Name=FC877913; organism=Citrus clementina; type=EST; length=813bpback to top |