FC877913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 2 Query: 428 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 601 +C++CL EF +DE+LRL+PKC+H FH CID WL+SH+ CP+CR+ + TT QP Sbjct: 180 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV---PTTQQP 234
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14 Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSE 607 LD VI + PTFV +K ECAVCL+ E+ + R++P C HVFH C+D WL + +TCPVCR+ P+P E Sbjct: 76 LDSLVIASLPTFVVG----IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPRE 158
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.129e-14 Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG-ETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQA 691 L +++ + P +Y + T+ +C+VCL +++ +E L+ +P C H FH ECID WL SHTTCP+CR +L +P + + Q E+ SS +E N + + ++ +A Sbjct: 73 LSKDIREMLPIVIYKESFTVN----DTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSS---IENTNGGEASTQPDSQSATEA 181
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.129e-14 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 428 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG---------ETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCSQPPEPQ 718 +C+VCL+EF+++E+LRL+PKC+H FH CID WL+SH+ CP+CR+ + + + + + + + + + N + + ET + +PPE Q Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQ 263
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.005e-14 Identity = 28/45 (62.22%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 428 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRS 562 +C+VCL+EFE++E+LRL+PKC+H FH CID WL+SH+ CP+CR+ Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5M_ARATH (RING-H2 finger protein ATL5M OS=Arabidopsis thaliana GN=ATL5M PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.329e-13 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 368 TFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 589 T PT VYS L++ ECA+CL+EFE E+++++ KC H FH +CI WL + ++CP CR+++ S+ ET Sbjct: 88 TTPTLVYSS--DLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHSET 159
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL5E_ARATH (Putative RING-H2 finger protein ATL5E OS=Arabidopsis thaliana GN=ATL5E PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.042e-13 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDL 631 LDR VI+++P V D + L C++CL ++E E +R IP+C+H FH +C+D WL + TCP+CR+ +P PS L + DL Sbjct: 67 LDRPVIESYPRIVLGDSRRLPRPNNG-PCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRN---------SPAPSRLATPLSDL 151
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3K_ARATH (RING-H2 finger protein ATL3K OS=Arabidopsis thaliana GN=ATL3K PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 347 LDREVIDTFPTFVYS-DVKTLKVGKGALE-------CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSEL 610 LD VI+++P F ++ D+ + G G + C++CL E+ ++E LR++P+C H FH C+DAWL+ + +CPVCR++ P ++TPQ + L Sbjct: 100 LDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTP-QSTPQSTPL 194
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 416 KGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQN-DAAVAAETPQETQPQAQCSQPPEP 715 K LEC++CL+E + RL+PKC+H FH ECID W +SH+TCP+CR+ T P + S V+ N + A + Q S P P Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRN--------TVLGPEQASSKRVEQVPDNAENAGTTNNNHDALSQLSTSSPEFP 214
BLAST of FC877913 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.776e-13 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 347 LDREVIDTFPTFVY-SDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVD 628 L ++ + P +Y S + +K A EC +CL +FED E +R++PKC+H FH CID WL S ++CP CR +L E QPS + S D Sbjct: 89 LKKQALKQIPVGLYGSGIIDMK----ATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE------QPSPMAVSRRD 173 The following BLAST results are available for this feature:
BLAST of FC877913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877913 ID=FC877913; Name=FC877913; organism=Citrus clementina; type=EST; length=813bpback to top |