FC877915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.015e-18 Identity = 42/49 (85.71%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 4 SKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 ++DRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLLQQ+E Sbjct: 75 NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.015e-18 Identity = 42/49 (85.71%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 4 SKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 ++DRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLLQQ+E Sbjct: 75 NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 1 Query: 4 SKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 +KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLL+ AE Sbjct: 75 TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAE 123
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: TCP6_ARATH (Transcription factor TCP6 OS=Arabidopsis thaliana GN=TCP6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.122e-17 Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 PSKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 P+KDRH KV+GRGRR+R+P +CAAR++QLT+ELGHKSDGET+EWLLQ AE Sbjct: 67 PNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAE 116
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.610e-16 Identity = 39/49 (79.59%), Postives = 46/49 (93.88%), Query Frame = 1 Query: 4 SKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 S DRH+KV GRGRR+R+PA+ AARVFQLTRELGH++DGETIEWLL+QAE Sbjct: 56 SSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAE 104
BLAST of FC877915 vs. ExPASy Swiss-Prot
Match: TCP11_ARATH (Transcription factor TCP11 OS=Arabidopsis thaliana GN=TCP11 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.715e-16 Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 1 Query: 4 SKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAE 150 +KDRHTKV+GR RR+ MPA+ AAR+FQLTRELGHK++GETIEWLL QAE Sbjct: 43 TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAE 91 The following BLAST results are available for this feature:
BLAST of FC877915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877915 ID=FC877915; Name=FC877915; organism=Citrus clementina; type=EST; length=927bpback to top |