FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THEPD (Prolyl-tRNA synthetase OS=Thermofilum pendens (strain Hrk 5) GN=proS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.579e-33 Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET +M++ WI S+RDLPL + Q +V R E T+P +R EFLW E H A AT EEA + + ++ K +E IP + R+ + F+GA TY + +M D Sbjct: 109 LRPTSETAFYYMYSYWIQSWRDLPLKLYQSVSVYRNEKNTRPLIRGREFLWIEAHDAFATHEEALNQIREDMENSRKVIWEKLGIPFLFLRRPPWDKFSGAEDTYAADTIMPD 221 HSP 2 Score: 75.0998 bits (183), Expect = 4.579e-33 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 245 NRERVITPRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + + + +S+DF+ WY V+S A L D V+G +V +P+ I +AI + + ++TGH + FP IP EKE HVEGF PE+ VT G ++LE +L Sbjct: 2 SEQGITVSKSEDFSEWYSQVLSKAGLVDLRYNVQGFVVHKPWLMRIIKAIYRFFEEELEKTGHEPVLFPLVIPEENFEKEKEHVEGFKPEVFWVTQAGDEKLERRL 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCGA (Prolyl-tRNA synthetase OS=Mycoplasma gallisepticum GN=proS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.419e-31 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE +++ + + +YR LP+ NQW +V R E T+PF+R EF W E H+ T E++ A+ + +Y +F + IP++AG K++ E FAGA TYT+E +M D Sbjct: 107 LRPTSEIAFCNLWRETLRNYRQLPIKHNQWTSVFRVEKNTRPFLRNSEFFWHEIHSCFETEEQSNDFAVDIWKLYQRFIKDILCIPLVAGEKTEAEKFAGAKTTYTVETIMPD 219 HSP 2 Score: 60.077 bits (144), Expect = 1.419e-31 Identity = 28/93 (30.11%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 ++ + + + + + WY +VIS L Y ++G M P G+ IW+ I+ L +F + + P I + E H+EGF+PEL +VT Sbjct: 4 KKNLASSKDDNISDWYTEVISKGNLIHYSNIKGFMSFLPNGWKIWQLIKKELTKEFDQRDILELCLPSLISQNDFLLEKKHLEGFAPELFIVT 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCMO (Prolyl-tRNA synthetase OS=Mycoplasma mobile GN=proS PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 495 RDSVQNWLL*LLEVERN*KK----NLWL*QVRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +D VQ + L+ VE+ K L+L RPTSE + F ++SY DLPLL+NQWANV RWE T PF+R EFLWQEGHT+H + EEA + + +MI IY F E AIPVI G+K++ E FAGA TYTIEAMM D Sbjct: 83 KDHVQGFAPELITVEKVGDKVLNEKLFL---RPTSEVLFAEYFKTQLNSYNDLPLLLNQWANVFRWEKTTSPFLRNSEFLWQEGHTSHYSEEEAHQFSKKMIQIYANFFEEFLAIPVIIGQKTESEKFAGAHTTYTIEAMMKD 222 HSP 2 Score: 97.0561 bits (240), Expect = 1.540e-19 Identity = 48/100 (48.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP QDF WY DVI+ LA YG ++G +V P Y IWE +Q N KE N+Y P IP S I E HV+GF+PEL V G K L EKL Sbjct: 9 ITPLEQDFAKWYTDVITKGNLATYGVLKGNIVFMPNSYGIWENVQSNFNKIIKELNVKNLYLPTLIPESLINSEKDHVQGFAPELITVEKVGDKVLNEKL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METS5 (Prolyl-tRNA synthetase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=proS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.313e-31 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK 556 S +F+ W+ VIS AE+ DYG PV+G+ V PYG+ I + + + ETGH + FP IP + ++KEA H++GF E+ VT GG ELEE+ Sbjct: 9 SSNFSEWFDWVISQAEIYDYGRYPVKGSGVWMPYGFKIRQNVTTLIRKLLDETGHEEVLFPLLIPETLLKKEAEHIKGFEKEVFWVTHGGEDELEER 105 HSP 2 Score: 73.1738 bits (178), Expect = 5.313e-31 Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + M + WI Y LP Q +V R+E + T+P +R E ++E HT H T E+A ++ + ++IY+KF ++ IP + R+ + + FAGA T ++ +M D Sbjct: 108 LRPTSEVAITLMESLWIKGYSQLPRKFYQIVSVFRYETKATRPMIRVRELSTFKEAHTVHETFEDAARQVDEAVEIYSKF-FDILGIPYLISRRPEWDKFAGAEYTIALDTIMPD 221
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_NANEQ (Prolyl-tRNA synthetase OS=Nanoarchaeum equitans GN=proS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.585e-30 Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +MF +WI SYRDLPL++ V R+E + TK +R E LW E H+ H + E+A + + ++Y ++ +P I R+ + + F G TY +A+M D Sbjct: 103 LRPTSETEMYYMFAKWIESYRDLPLIIYMTNTVYRYETKSTKALIRGREVLWNETHSVHRSEEDAREHMAKAKEVYDYIFWDVLYLPYIWVRRPEWDKFPGGEETYAADAIMPD 216 HSP 2 Score: 69.3218 bits (168), Expect = 2.585e-30 Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 +S++ WY +++ A + D PV+G V +PYGY ++ + L K + G +FP IPYS +KE+ H++GF E+ + G +LE+ L+ Sbjct: 4 KSENPKEWYNEIVRKANIIDDAYPVKGMPVYKPYGYKAFKFLMSLLENKLESIGAEPAWFPIVIPYSIFKKESEHIKGFEEEVFWIERAGNDKLEDPLI 102
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CALMQ (Prolyl-tRNA synthetase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=proS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.717e-30 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 266 PRSQ--DFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 PRS+ F W+ VI +AE+ DY PV+G + RPYG AI ++ + ETGH + FP FIPY F KE+ H+ GF E+ V+ G G EE+LV Sbjct: 9 PRSRWVSFIEWFNKVIMDAEVYDYRYPVKGAYIWRPYGVAIRRNVEALIRRLHDETGHQEVLFPVFIPYEFFSKESEHIRGFESEVFWVSKGTGG--EERLV 108 HSP 2 Score: 75.0998 bits (183), Expect = 5.717e-30 Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + MF WI + DLPL V Q +V R E + T P +R E +++E HTAHA ++AE++ + + IY + + IP + R+ + FAGA T + +M D Sbjct: 109 LRPTSETAMMPMFKLWIRDHTDLPLRVYQIVSVFRAETKMTHPMIRLREISMFKEAHTAHADRDDAERQVKEAVGIYRRI-MDELCIPYLISRRPDWDKFAGAVYTIAFDTIMPD 222
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_AERPE (Prolyl-tRNA synthetase OS=Aeropyrum pernix GN=proS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.691e-30 Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +M T WI SYR LP Q ++ R+E + T+P +R E ++E HT H + E+AE++ ++ I++Y K ++ IP + ++ + + FAGA T + +M D Sbjct: 110 LRPTSETSITYMETFWIKSYRQLPKKYYQVVSIFRYETKATRPMIRLREVTTFKEAHTVHESFEDAERQVLEAIEVY-KAIFDRLLIPYVISKRPEWDKFAGALYTIAFDTIMPD 223 HSP 2 Score: 74.3294 bits (181), Expect = 9.691e-30 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 S DF W+ VI AE+ DYG PV+G V PYG+ I + + + TGH + FP IP + +E+ H+ GF E+ VT GG +EL+ KL Sbjct: 11 SSDFPRWFDWVIETAEVYDYGRYPVKGMGVWMPYGFQIRRRVLEVVRGLLDSTGHEEVLFPLLIPEHLLRRESEHIRGFEGEVYWVTHGGREELDVKL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METJA (Prolyl-tRNA synthetase OS=Methanocaldococcus jannaschii GN=proS PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.644e-29 Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +M W+ + DLP+ + Q N R+E + T+P +R E + ++E HTAH+T EEAE + + I IY KF ++ IP + ++ + + F GA T + + D Sbjct: 98 LRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKF-FDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPD 211 HSP 2 Score: 71.633 bits (174), Expect = 1.644e-29 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 278 DFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +F+ WY D++ AE+ D P++G V PYG+ I + + E+GH FP IP + KEA H++GF E+ VT GG +L+ KL Sbjct: 2 EFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKL 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SULAC (Prolyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=proS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.139e-29 Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +M T W+ SY+ LP Q +V R+E + T+P +R E ++E HT H T E+AE++ + I+IY F +E IP I ++ + + FAGA T + +M D Sbjct: 108 LRPTSETAITYMETYWVQSYKQLPKKYYQIVSVFRYETKATRPMIRLREVSTFKEAHTLHETYEDAERQVKEAIEIYKNF-FEELGIPYIMSQRPEWDKFAGAIYTIAFDTIMPD 221 HSP 2 Score: 69.3218 bits (168), Expect = 2.139e-29 Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 278 DFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +F+ W+ VI AE+ DYG PV+G V PYG+ I +A D + GH + FP +P + +E H++GF E+ VT GG + L+ +L Sbjct: 11 NFSEWFDWVIREAEIYDYGRYPVKGMGVWLPYGFKIRQAAVDLIRKLLDAKGHEEVLFPLLVPEDLLRREGEHIKGFESEVFWVTKGGEENLDIRL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCGE (Prolyl-tRNA synthetase OS=Mycoplasma genitalium GN=proS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.785e-29 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE +++ + SY DLPL+ NQW V R E T+PF+R EF WQE H ++E+ A+ ++Y IP G KS+ E FAGA T+TIEA+M D Sbjct: 121 LRPTSEIAFCNLWKKQELSYHDLPLIYNQWTQVFRAEKNTRPFLRNSEFYWQETHGLFVDQSQSEQAAISFWNLYQDLIINKLCIPAFVGLKSESEKFAGAKNTWTIEAIMPD 233 HSP 2 Score: 56.9954 bits (136), Expect = 2.785e-29 Identity = 35/120 (29.17%), Postives = 57/120 (47.50%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLN--------------VKFKETGH-----SNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 +T ++QD +WY ++ A+L +G V+GT+ + +W IQ N KF+ T + P YS +KE +H++GF+PEL L+ G K+L + LV Sbjct: 1 MTKKTQDLTSWYDQLLVKAKLICHGEVKGTVCFLNNSWGLWMEIQQLYNDAIANKNQLSAIALTKFQPTTSFCYQVFQVQLPTLSFYSEYQKEKTHIKGFNPELFLINQVGQKQLNDPLV 120 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |