FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METBU (Prolyl-tRNA synthetase OS=Methanococcoides burtonii (strain DSM 6242) GN=proS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.564e-26 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M+ W+ S+ DLPL + Q N R+E + T+P +R E ++E HT HAT +EA + + I +Y +F Y+ AIPV+ ++ + F GA T ++++M D Sbjct: 110 LRPTSETAIYPMYRLWVRSHADLPLKLYQIVNTFRYETKHTRPLIRLREITSFKEAHTVHATWDEAASQVEEAIRLYIEF-YKRLAIPVLPSKRPSWDKFPGADYTIAVDSLMPD 223 HSP 2 Score: 59.3066 bits (142), Expect = 1.564e-26 Identity = 33/99 (33.33%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 266 PRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 P ++F+ WY ++ AE+ D PV+G+ V P+G++I + D + + H FP IP + KEA H++GF E+ V GG L+ KL Sbjct: 11 PSKENFSEWYNGMLQIAEIMDVRYPVKGSYVWYPFGFSIRRNVYDIIR-GLLDKDHQETLFPLLIPENEFMKEAEHIKGFEEEVYWVLNGGTTPLDVKL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PYRHO (Prolyl-tRNA synthetase OS=Pyrococcus horikoshii GN=proS PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.448e-26 Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 S++F+ W+ +VI A + D PV+G V PYG I I+ +++ + + TGH + FP IP + +KEA H+ GF E+ VT G + L+ +LV Sbjct: 8 SEEFSEWFNEVIEEAGILDKRYPVKGMNVWLPYGLKIMRNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFWVTHAGHEPLDVRLV 105 HSP 2 Score: 69.3218 bits (168), Expect = 3.448e-26 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + MF WI S+ DLP V Q NV R+E + T+P +R E + E HTAHA E+AE++ + ++I+ A+ I ++ + + F GA + E +M D Sbjct: 106 LRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYETKHTRPLIRVREISRFFEAHTAHADFEDAERQIKEDLEIFDNL-MRKLALAYIISKRPEWDKFPGAFYSLGAEVVMPD 219
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METTP (Prolyl-tRNA synthetase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=proS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.603e-26 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M WI S+ DLPL + Q N R+E + T+P +R E ++E HTAHAT EEA + I Y +F Y AIP + ++ + F GA + ++ +M D Sbjct: 111 LRPTSETAIYPMLKLWIRSHADLPLRIYQIVNTFRYETKHTRPLIRLREITSFKEAHTAHATWEEAAMQVEIAIQRYIEF-YRRLAIPCLVSKRPSWDKFPGADYSIALDVIMPD 224 HSP 2 Score: 62.3882 bits (150), Expect = 7.603e-26 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYA----IWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 R+ + P+S +F+ WY +++ +AE+ D PV+G V P+G+A +++ I++ L+V ET FP IP + KEA H++GF E+ VT GG L+ KL Sbjct: 7 RDAKLPPKS-NFSEWYHELLRSAEIVDVRYPVKGMSVWYPFGFALRSHVYQIIKELLDVDHYET-----QFPLLIPETEFMKEAEHIKGFEDEVYWVTHGGRDPLDIKL 109
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PYRFU (Prolyl-tRNA synthetase OS=Pyrococcus furiosus GN=proS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.896e-26 Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + MF WI S+ DLP V Q NV R+E + T+P +R E + E HTAHA E+AE++ + ++I+ + AI + ++ + + F GA + E +M D Sbjct: 106 LRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYETKHTRPLIRVREISRFFEAHTAHADFEDAERQIKEDLEIFDNL-MKKLAIAYVISKRPEWDKFPGAYYSLGAEVVMPD 219 HSP 2 Score: 68.5514 bits (166), Expect = 9.896e-26 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 S++F+ W+ +VI A + D PV+G V PYG I + I+ +++ + + T H + FP IP + +KEA H+ GF E+ VT G + L+ +LV Sbjct: 8 SENFSEWFNEVIEEAGILDKRYPVKGMNVWLPYGLKIMKNIEKFIHEEMERTDHQEVLFPALIPETEFQKEAEHIAGFEGEVFWVTHAGHEPLDVRLV 105
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METLZ (Prolyl-tRNA synthetase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=proS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.288e-25 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M+ W+ S+ DLPL + Q N R+E + T+P +R E + E HT H ++A K+ + + T+F Y +P+I R+ + F GA T I+A+M D Sbjct: 108 LRPTSETAIYPMYALWVRSHADLPLKLYQVVNTFRYETKHTRPLIRLREITSFMESHTVHTDWDDANKQVEYELGLATEF-YRDLGVPIIISRRPDWDKFPGADFTMAIDAVMPD 221 HSP 2 Score: 62.7734 bits (151), Expect = 1.288e-25 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 266 PRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAI----WEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 P DF+AWY +VI A++ D PV+G V P+G+A+ + ++ LN +ET FP IP + KEA H++GF E+ VT GG L+ KL Sbjct: 9 PSRTDFSAWYNEVIRRADIMDVRYPVKGLYVWYPFGFALRNHTYTLLRSLLNRDHEET-----LFPLLIPETEFMKEAEHIKGFEDEVYWVTHGGLSPLDVKL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THENV (Prolyl-tRNA synthetase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=proS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.676e-25 Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M WI Y+DLPL + Q +V R E + T P +R E +++E HT H E+AE++ + ++IY K ++ + + ++ + FAGA T + ++ D Sbjct: 111 LRPTSETAIMPMVKLWIQDYKDLPLRLYQIVSVFRAETKMTHPMIRLREISMFKEAHTVHVDREDAERQVREAVEIY-KRIFDEMCLAYMINKRPDWDKFAGAEYTIAFDTVLPD 224 HSP 2 Score: 67.781 bits (164), Expect = 1.676e-25 Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 290 WYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 W+ ++ AEL D PV+G V RPYG + +++ + ETGH + FP FIPY F KE+ H+ GF E+ V+ GG E E+LV Sbjct: 21 WFHWLLREAELYDVRYPVKGAYVWRPYGMKLRRNVEELIRRVHDETGHEEVLFPVFIPYEFFGKESQHIRGFEKEVFWVSKGG--EGGERLV 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METTH (Prolyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=proS PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.839e-25 Identity = 41/115 (35.65%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET++ MF W+ S+ DLP+ Q N R+E + T+P +R E ++E HT HAT EAE++ + ++IY +F + IP + R+ + F G+ T + +M D Sbjct: 114 LRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEF-FNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMPD 227 HSP 2 Score: 58.151 bits (139), Expect = 2.839e-25 Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 278 DFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +F+ W+ +++ AE+ D PV+G V P+G+ I + L + + H + FP +P + KEA HV+GF E+ VT GG +L+ KL Sbjct: 19 EFSEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILR-RILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKL 112
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PYRCJ (Prolyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=proS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.808e-25 Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M W+ Y+DLPL + Q +V R E + T P +R E +++E HT H E+AE++ + ++IY K ++ + + R+ + FAGA T + ++ D Sbjct: 112 LRPTSETAIMPMVKLWVQDYKDLPLRLYQIVSVFRAETKMTHPMIRLREISMFKEAHTVHVDREDAERQVREAVEIY-KRIFDEMCLAYMINRRPDWDKFAGAVYTIAFDTVLPD 225 HSP 2 Score: 66.2402 bits (160), Expect = 4.808e-25 Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 290 WYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 W+ ++ AE+ D PV+G V RPYG I ++ + ETGH + FP FIPY F KE+ H+ GF E+ V+ GG E E+LV Sbjct: 22 WFHWLLREAEIYDVRYPVKGAYVWRPYGMKIRRNVEALIRRLHDETGHEEVLFPVFIPYEFFGKESEHIRGFEKEVFWVSKGG--EGGERLV 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METS3 (Prolyl-tRNA synthetase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=proS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.262e-25 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M++ WI S+ DLPL Q N R+E + T+P +R E ++E HTAHA+ EEA+ + + I+ Y K ++ IP ++ + + F GA T +A+M D Sbjct: 99 LRPTSETSIYPMYSLWIRSHIDLPLKYYQIVNTFRYETKHTRPLIRVREITTFKEAHTAHASKEEADIQVQEHIENY-KEIFDTLGIPYTLTKRPEWDKFPGADYTMAFDAIMPD 212 HSP 2 Score: 61.2326 bits (147), Expect = 6.262e-25 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 275 QDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ++F+ W+ D++ A + D P++G V PYG+ I + + + + + H + FP +P + + KE HV+GF E+ VT GG +L EKL Sbjct: 3 ENFSEWFHDILEEANITDSRYPIKGMAVWMPYGFQIRKYTTNLIKEVY-DRDHEEVLFPLLVPEAELAKEGLHVKGFEDEVYWVTHGGKTQLNEKL 97
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THEVO (Prolyl-tRNA synthetase OS=Thermoplasma volcanium GN=proS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.797e-24 Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMM 905 +RPTSE+ + MF+ W+ S+ DLPL + Q +V R+E + T+ F+R E + E HTAH + E+AEK+ + I+T+ A + +P + ++ + + F GA T + +M Sbjct: 103 LRPTSESAMYPMFSLWVRSHADLPLKIYQIVSVYRYETKHTRSFIRIREIHFFEAHTAHESYEDAEKQMDEYRIIWTEIA-DALCLPFLYDQRPEWDKFPGAMYTIAFDTVM 213 HSP 2 Score: 63.5438 bits (153), Expect = 1.797e-24 Identity = 31/98 (31.63%), Postives = 56/98 (57.14%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + ++F+ WY ++++ ++L+D P++G V RPYG+ I + I + + + + FP I +E E H+ GF E+ VT GG ++LEE+L Sbjct: 4 KKENFSEWYNEIVTISDLSDKRYPIKGMNVWRPYGWKIMKLIDNIIRNAVDKHSFDEVNFPVLISRGMLEVEFEHIRGFENEIYWVTKGGKEKLEEEL 101 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |