FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCMS (Prolyl-tRNA synthetase OS=Mycoplasma mycoides subsp. mycoides SC GN=proS PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.175e-64 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE ++ F+ I+SYRDLPL+ NQW NV RWE T+PF+RT EFLWQEGHT H++ EAE +++++IY KFA E +PVI G+K++ E FAGA TYTIE++M D Sbjct: 109 IRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRPFLRTSEFLWQEGHTIHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAGAKDTYTIESLMFD 221 HSP 2 Score: 129.028 bits (323), Expect = 5.175e-64 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITPR+ DF+ WY D++ N +LA YGPV+GTM+ RPYGY IWE IQ YL+ +FK+ N+YFP IP S KE H+EGFSPE+A VT G K+LEE L Sbjct: 8 ITPRNIDFSQWYTDIVLNTKLASYGPVKGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIATVTRVGQKKLEENL 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_AMOA5 (Prolyl-tRNA synthetase OS=Amoebophilus asiaticus (strain 5a2) GN=proS PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.797e-64 Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + + WI SYRDLPLL+NQW NV RWEMRT+ F+RT EFLWQEGHTAHAT EAE+EA+QM++IY F ++ AIP + G K++ E FAGA TYTIEA+M D Sbjct: 120 VRPTSETIIWNSYKNWIQSYRDLPLLINQWCNVVRWEMRTRLFLRTAEFLWQEGHTAHATQAEAEQEALQMLNIYADFGKDYLAIPFLKGIKTEHERFAGAEETYTIEALMQD 232 HSP 2 Score: 107.842 bits (268), Expect = 8.797e-64 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 R+++F+ WY ++I AELA+ VRG M IRPYG+AIWE +Q L+ FK TGH N YFP FIP S++ +EA+HVEGF+ E A+VT Sbjct: 8 RAENFSEWYNEIIKRAELAENAAVRGCMTIRPYGFAIWEKMQAILDKAFKATGHENAYFPIFIPKSYLNREAAHVEGFAKECAVVT 93
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLAD (Prolyl-tRNA synthetase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=proS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.798e-64 Identity = 69/114 (60.53%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +++WI SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ ++Y F + A+PVI G K++ E F GA R+Y IEAMM D Sbjct: 108 IRPTSETIIGYFYSKWIRSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHEVYADFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQD 221 HSP 2 Score: 114.39 bits (285), Expect = 8.798e-64 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 251 ERVITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 + VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E V Sbjct: 3 KEVITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHANVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYV 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCCT (Prolyl-tRNA synthetase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=proS PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 8.799e-64 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE ++ F+ I+SYRDLPL+ NQW NV RWE T+PF+RT EFLWQEGHT H++ EAE +++++IY KFA E +PVI G+K++ E FAGA TYTIE++M D Sbjct: 109 IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTTRPFLRTSEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAGAKDTYTIESLMFD 221 HSP 2 Score: 128.257 bits (321), Expect = 8.799e-64 Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITPR+ DF+ WY D++ N +LA YGPV+GTM+ RPYGY IWE IQ YL+ +FK+ N+YFP IP S KE H++GFSPE+A VT G K+LEE L Sbjct: 8 ITPRNIDFSQWYTDIVLNTKLASYGPVKGTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATVTRVGQKQLEENL 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CYTH3 (Prolyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=proS PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.950e-63 Identity = 70/113 (61.95%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ + + WI S+RDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT +EA E QM+++Y FA A+PV G KS E FAGA TY IEA+M D Sbjct: 120 VRPTSETVIWNTYKTWIQSHRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATKQEAIVETEQMMNVYATFAQNFMALPVHRGIKSANERFAGAEETYCIEALMQD 232 HSP 2 Score: 117.472 bits (293), Expect = 1.950e-63 Identity = 50/91 (54.95%), Postives = 70/91 (76.92%), Query Frame = 2 Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 +V+ RS D++ WY +++ A+LA+ PVRG M+I+PYGY+IWE +Q L+ FKETGHSN YFP FIP S++ KEASH++GF+ E A+VT Sbjct: 3 KVLPKRSDDYSLWYNELVKRADLAENAPVRGCMIIKPYGYSIWEKMQAVLDKMFKETGHSNAYFPLFIPKSYLSKEASHIDGFAKECAVVT 93
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACCR (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=proS2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.353e-63 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D Sbjct: 110 VRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 126.331 bits (316), Expect = 7.353e-63 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K KETGH N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MESFL (Prolyl-tRNA synthetase OS=Mesoplasma florum GN=proS PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.353e-63 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE ++ + F + SYRDLPL+ NQW NV RWE T+PF+RT EFLWQEGHT H+ +EA ++++D YT+FA +PVI G+K++ E FAGA TYTIE++M D Sbjct: 108 IRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRPFLRTSEFLWQEGHTVHSERKEASDLTLKILDTYTEFAQNALLLPVIPGKKTEKEKFAGADSTYTIESLMHD 220 HSP 2 Score: 128.257 bits (321), Expect = 7.353e-63 Identity = 59/100 (59.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITPR DF+ WY D + NA+LA YGPV+GT++ RPYGYAIWE IQ YL+ KFKE N+YFP IP S +KE H+EGFSPE+A VT G L E L Sbjct: 7 ITPRDVDFSQWYTDTVINAKLASYGPVKGTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATVTRVGDTPLPEPL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_EUBR3 (Prolyl-tRNA synthetase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=proS PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.771e-62 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ +F++ + S+RDLP + NQW +V RWE T+PF+R+ EFLWQEGHT HAT EEAE +QM++IY F ++ AIP++ GRK+ E FAGA TYTIEA+M D Sbjct: 112 VRPTSETLFCELFSKTVQSHRDLPKVYNQWCSVVRWEKTTRPFLRSSEFLWQEGHTVHATAEEAEARTVQMLNIYADFCEKYLAIPMVKGRKTDKEKFAGAEATYTIEALMHD 224 HSP 2 Score: 119.398 bits (298), Expect = 2.771e-62 Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT +DF WY DV+ AEL DY V+G M+ +P GYAIWE IQ L+ FKETG N+Y P FIP S ++KE HVEGF+PE+A VT GG + L+E+L Sbjct: 11 ITSMEEDFTQWYTDVVKKAELMDYSSVKGCMIFKPNGYAIWENIQKNLDAMFKETGVENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGLETLQERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACAN (Prolyl-tRNA synthetase 2 OS=Bacillus anthracis GN=proS2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.611e-62 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D Sbjct: 110 VRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 124.02 bits (310), Expect = 3.611e-62 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACHK (Prolyl-tRNA synthetase 2 OS=Bacillus thuringiensis subsp. konkukian GN=proS2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.613e-62 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D Sbjct: 110 VRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 124.02 bits (310), Expect = 3.613e-62 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |