FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SPHEL (Prolyl-tRNA synthetase OS=Sphingomonas elodea GN=proS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.129e-61 Identity = 67/113 (59.29%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ ++W+ S+RDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA++E +M+++Y FA A+PV+AG K + E F GA T++IEAMM D Sbjct: 120 VRPTSETVIGAAMSRWVQSWRDLPVLINQWANVVRWEMRTRMFLRTAEFLWQEGHTAHATVEEAQEETRKMLEVYRDFAETCLAMPVVAGEKPENERFPGAVSTFSIEAMMQD 232 HSP 2 Score: 107.071 bits (266), Expect = 5.129e-61 Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 R DF WY VIS A++A+ VRG MVIRP+GY IWE IQ L+ + K TGH N YFP FIP S+ EKEA HV+GF+ E+A+VT Sbjct: 10 RDGDFAQWYQTVISEADMAEDSGVRGCMVIRPWGYGIWERIQRLLDDRIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVT 95
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOBH (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=proS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.132e-61 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K+ E FAGA TYTIE++M D Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 124.79 bits (312), Expect = 5.132e-61 Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP +DF WY D++ AELADY +RG M+IRP GY IWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOB1 (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=proS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.132e-61 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K+ E FAGA TYTIE++M D Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 124.79 bits (312), Expect = 5.132e-61 Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP +DF WY D++ AELADY +RG M+IRP GY IWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_AKKM8 (Prolyl-tRNA synthetase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=proS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.688e-61 Identity = 65/114 (57.02%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSET++ F +W SYRDLPL VNQW NV RWEMR + F+RT EFLWQEGHTAH T EEA +E + M +Y +F + AIP I G K++ E F GA +TYT+EAM+ D+ Sbjct: 125 IRPTSETVIGAAFARWTSSYRDLPLKVNQWCNVMRWEMRPRIFLRTAEFLWQEGHTAHETREEAIEETLTMHKVYEEFQRDVLAIPTIPGEKTEAERFPGAEQTYTVEAMVQDR 238 HSP 2 Score: 113.62 bits (283), Expect = 6.688e-61 Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 245 NRERVITP-RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVAVTGST 580 +++ ITP R+QDF WY VI A++A+ VRG MVI+P+GYAIWE IQ L+ +FK+TGH+N YFP IP S++EKEA H EGF+ E A+VT LE + TG T Sbjct: 2 SQQTAITPTRAQDFPEWYQQVIKAADMAENSEVRGCMVIKPWGYAIWELIQKDLDQRFKDTGHTNAYFPLLIPISYLEKEAEHAEGFATECAVVT---HHRLEAQKDEATGKT 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_DEIRA (Prolyl-tRNA synthetase OS=Deinococcus radiodurans GN=proS PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.483e-60 Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ HM++ W++SYRDLP L QW +V R E+RTK F+RT EF W EGHTAHA EA E Q +D+Y +F + A+PV+ G K+ E FAGA TY+IE MM D Sbjct: 123 MRPTSETIIGHMWSGWLNSYRDLPFLHYQWGSVFRAELRTKAFLRTSEFFWHEGHTAHADEAEARAEVRQQLDLYHEFCRDVLALPVVRGEKTASERFAGAVATYSIEGMMRD 235 HSP 2 Score: 122.094 bits (305), Expect = 1.483e-60 Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 2 Query: 215 EKNRASQDRGNRERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 +K+ QD+ ++ +TP+S DFN WY +V+ A+LAD PV G MV+RPYG A+WE IQ +L+ +FK +GH ++ FP IP +FI KEA HVEGF+PEL V G +EL E V Sbjct: 7 KKDNQGQDKKAQQYGVTPQSVDFNDWYNEVVKKADLADNSPVAGAMVVRPYGSALWENIQRWLDDRFKASGHESLIFPTLIPMNFIMKEADHVEGFAPELFTVNKIGTEELAEPYV 122
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_DEIGD (Prolyl-tRNA synthetase OS=Deinococcus geothermalis (strain DSM 11300) GN=proS PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.483e-60 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ +M++ W++SYRDLP L QW +V R E+RTK F+RT EF W EGHTAHA+ EEA +E Q++D+Y +F + A+PV+ G K+ E FAGA TY+IE MM D Sbjct: 121 LRPTSETIIGYMWSGWLNSYRDLPFLHYQWGSVFRAELRTKAFLRTSEFYWHEGHTAHASEEEARREVRQILDLYHEFCRDILALPVVRGEKTASERFAGAVATYSIEGMMRD 233 HSP 2 Score: 120.168 bits (300), Expect = 1.483e-60 Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 218 KNRASQDRGNRERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 K QD+ ++ +TP+S DFN WY +V+ A+LAD PV G MV++PYG A+WE IQ +L+ +FK TGH ++ FP IP +FI KEA HVEGF+PEL V G ++L E V Sbjct: 6 KAEGKQDKKAQQYGVTPQSVDFNDWYNEVVKKADLADNSPVAGAMVVKPYGTALWENIQRWLDDRFKATGHESLIFPTLIPMNFITKEADHVEGFAPELFTVDRIGTEQLTEPYV 120
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_EUBE2 (Prolyl-tRNA synthetase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=proS PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.588e-60 Identity = 68/113 (60.18%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ + I SYRDLP + NQW +V RWE T+PF+R+ EFLWQEGHTAHAT EEAE QM+++Y F E AIPVI GRK+ E FAGA TYTIEA+M D Sbjct: 112 VRPTSETLFCDFYKDEIQSYRDLPKVYNQWCSVVRWEKETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYADFCEEVLAIPVIKGRKTDKEKFAGAEATYTIEALMHD 224 HSP 2 Score: 111.309 bits (277), Expect = 5.588e-60 Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT +DF WY DV AEL Y V+G M+ +P GYAIWE I++ ++ +FKETG N+Y P FIP S +E E HVEGF+PE+A VT GG L+E++ Sbjct: 11 ITSMKEDFAQWYTDVCKKAELMSYSSVKGCMIFKPAGYAIWENIKNEMDRRFKETGVENVYLPMFIPESLLEVEKDHVEGFAPEVAWVTYGGLNPLQERM 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SPHAL (Prolyl-tRNA synthetase OS=Sphingopyxis alaskensis GN=proS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.079e-59 Identity = 66/113 (58.41%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ ++W+ S+RDLPL VNQWANV RWEMRT+ F+RT EFLWQEGHTAHA ++A E ++ +++Y FA + A+PVIAG K + E F GA TY+IEAMM D Sbjct: 140 VRPTSETVIGAAMSRWVQSWRDLPLKVNQWANVVRWEMRTRMFLRTSEFLWQEGHTAHADRDDAMAETLRALEMYRSFAEDVLAMPVIAGEKPENERFPGAVATYSIEAMMQD 252 HSP 2 Score: 106.686 bits (265), Expect = 6.079e-59 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 R DF AWY DVI+ A+LA+ VRG MVI+P+GY IWE IQ ++ K+ G N YFP FIP SF EKEA HV+GF+ E+A+VT Sbjct: 29 RQADFAAWYQDVIAEADLAEESGVRGCMVIKPWGYGIWERIQTVMDAAIKDAGVQNAYFPLFIPLSFFEKEADHVDGFAKEMAVVT 114
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCS5 (Prolyl-tRNA synthetase OS=Mycoplasma synoviae (strain 53) GN=proS PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.083e-59 Identity = 66/113 (58.41%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE I ++F + I+SY DLP + NQWANV RWE TKPF+RT EFLWQEGHT+H++ EEA ++MI Y KF + AIPV++G+K+ E FAGA TYT+EAMM D Sbjct: 108 VRPTSEVIFANLFKEDINSYNDLPKIYNQWANVVRWEKVTKPFLRTREFLWQEGHTSHSSAEEARSFTVKMIKEYEKFLKNYLAIPVVSGKKTCNEKFAGAVSTYTVEAMMKD 220 HSP 2 Score: 111.694 bits (278), Expect = 6.083e-59 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 ITP +DF WY DV++N L +YGP +GT++ +P Y IWE IQ LN FK+ G N+Y P FIP S + E HV+GF+PELA VT G K+L EKL+ Sbjct: 7 ITPLEKDFAQWYTDVVTNGNLMNYGPAKGTIIYKPNSYGIWENIQKTLNEVFKKHGVENIYAPLFIPESLFKIEKEHVQGFNPELATVTQVGNKKLSEKLI 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_ONYPE (Prolyl-tRNA synthetase OS=Onion yellows phytoplasma GN=proS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.988e-58 Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + + +++ I SYRDLP L NQW NV RWE TKPF+R EFLWQEGHT HAT +EA ++ + ++DIY K A+P + G+K++ E FAGA TY+IEA+M D Sbjct: 111 IRPTSEILFSQYYSKTITSYRDLPKLYNQWCNVVRWEKTTKPFLRGKEFLWQEGHTVHATEQEAMQQTLSILDIYQKLGKNLLALPFVCGKKTETEKFAGALITYSIEALMHD 223 HSP 2 Score: 114.775 bits (286), Expect = 2.988e-58 Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 R + +T RS DF WY DV AEL Y +G ++ PYGYA+WE IQ +LN ++TGH N+YFP P KE +H++GFSPE A++T G K L EKLV Sbjct: 6 RVKTVTARSSDFGKWYTDVCLKAELIAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKEKNHIQGFSPEAAMITTTGKKNLSEKLV 110 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |