FC877937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_CULQU (Eukaryotic translation initiation factor 3 subunit F OS=Culex quinquefasciatus GN=eIF3-S5 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.109e-43 Identity = 101/274 (36.86%), Postives = 148/274 (54.01%), Query Frame = 1 Query: 88 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDI-LKSTSVDKLPS---------DLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNT 879 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+Y RE NP+HLT+DT +KAYV V+L + + F I +++ E E VG + K+ V P+ DL + +L TL+ ++ YV+D + + PDN VGR L + + S+P + F K+ N + + QL L EKL + Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-EKGIVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLTAARMGIKAYVCVSLGVPGGKTGCMFTPINVEVTSYEPEVVGLSLCAKTIGVQSNPARPRTVSPMLDLAQVSEASGKLQTLLGEVLNYVEDVLAEKQQPDNFVGRALLDLIHSVPNMKHEEFAKMFNSNVKDLLMVVTLSQLIKTQLQLNEKLTS 281
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPCL (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus clavatus GN=ACLA_026150 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.223e-35 Identity = 97/284 (34.15%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKS-----TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T T +AY+S + + + A A F +P ++R EAE+ G + + S + +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L T+A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIET-RAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAISSARDAENRATNIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQFLLNTLALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_PHANO (Eukaryotic translation initiation factor 3 subunit F OS=Phaeosphaeria nodorum GN=SNOG_04858 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.515e-35 Identity = 88/281 (31.32%), Postives = 153/281 (54.45%), Query Frame = 1 Query: 79 ATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKSTS-----VDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 +T+ + + P +F+I D +RRP ERVIGTLLG+ DGT ++IRN Y VPH E ++QV +D++Y ML HL+ NP+EV+VGW++T + SALI FY ++ P+P VHLTV T + + Y+S + + + A F +P +++ EAE+ G +++ S ++ +DL+ +E ++ +L ++ + YV++ ++ A P +++G+ L ++ PK+ P ++ N R Q+ L+ +L TA Sbjct: 24 STAPLNVAIQPQAVFSILDHSLRRPADQERVIGTLLGTRSEDGTEIEIRNCYAVPHTETAEQVEVDMDYQKQMLALHLRANPREVLVGWYATSSDLNTFSALIQNFYSQQGDGTWPHPAVHLTVST-VPGQDIESRTYISAPIGVTAERAADSCLFIPVPHEIKYGEAEKSGLELISSAKDREDRSQEIMTDLDSLERAVQHVLDMLERVSNYVNNVLDEEAEPSSALGQFLMNALSLAPKVDPADIERDFNNHIQDVLVVSYLANTIRTQIDLSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPOR (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus oryzae GN=AO090005001590 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.407e-35 Identity = 94/284 (33.10%), Postives = 151/284 (53.17%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKS-----TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + +HP +F+I D +RR ERVIGTLLG+ DGT V+IR ++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + +AY+S + + + A A F +P ++R E E+ G + + + + + +D+E +E +E +L +I+ + KYV+ ++ A ++G+ L +A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIHPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTE-PGKDVETRAYISAPVGVTAERAADSAAFIPVPYEIRYGETEKSGLESIAAARDVESRAANIFTDIEALERAVEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_NEOFI (Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_016300 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.605e-34 Identity = 95/284 (33.45%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKS-----TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + +AY+S + + + A A F +P ++R EAE+ G + + S + + +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L +A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTE-PGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLETIASAKDAESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFU (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus GN=AFUA_1G09330 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.605e-34 Identity = 95/284 (33.45%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKS-----TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + +AY+S + + + A A F +P ++R EAE+ G + + S + + +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L +A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTE-PGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAIASAKDAESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_008750 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.605e-34 Identity = 95/284 (33.45%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKS-----TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + +AY+S + + + A A F +P ++R EAE+ G + + S + + +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L +A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTE-PGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAIASAKDAESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPNC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.669e-34 Identity = 98/290 (33.79%), Postives = 155/290 (53.45%), Query Frame = 1 Query: 64 GPSSAATSNVTAK----VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKSTSVDK-----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 GP + T+ TA + P +F+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T T +AY+S + + + A A F +P ++R EAE+ G + + + + + +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L T+A PK+ P ++ N R Q+ L+ +L TA Sbjct: 15 GPVAVGTAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIET-RAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAIGAARDAEERRANIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQYLLNTLALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.963e-34 Identity = 91/270 (33.70%), Postives = 131/270 (48.52%), Query Frame = 1 Query: 88 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST--------SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKL 873 N++ KVHP+V+F I D Y RR + RVIGTL G+ G V++ N + VPH E +DQV ++ Y + + + +VN E IVGW++TG VT S++IHE+Y RE PVH+T+DT G ++AYV V L + + + F + + L E E VG + + T S SDL + L +L+ +Y D G A D GR L + S P L+ F + + QL L EKL Sbjct: 4 NISVKVHPVVLFQIVDAYERRNADSHRVIGTLWGTS-DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTVSGGGRGSSGVAAGSDLAQVMSAASSLESLLEQALQYADGAAAG-APADAEAGRALLQLAHSAPDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKL 271
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.774e-33 Identity = 93/284 (32.75%), Postives = 150/284 (52.82%), Query Frame = 1 Query: 70 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 S+ T+ + + P +F+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + +AY+S + + + A A F +P ++R E E+ G + + + L +D+E +E +E +L +I+ + +YV+ ++ A ++G+ L +A PK+ P ++ N R Q+ L+ +L TA Sbjct: 21 SAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTE-PGKDIETRAYISAPVGVTAERAADSAAFIPVPHEIRYGETEKSGLEAIAAARDAEERAANLFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATA 303 The following BLAST results are available for this feature:
BLAST of FC877937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877937 ID=FC877937; Name=FC877937; organism=Citrus clementina; type=EST; length=884bpback to top |