FC877937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_COCIM (Eukaryotic translation initiation factor 3 subunit F OS=Coccidioides immitis GN=CIMG_07134 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.317e-33 Identity = 98/290 (33.79%), Postives = 148/290 (51.03%), Query Frame = 1 Query: 64 GPSSAATSNVTAK----VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLA--AQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLNTA 882 GP++ + TA + P IF+I D +RR ERVIGTLLG+ DGT V+IR + V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T + + Y+S + + + A A F +P ++R EAER G + + L +D+E +E +E +L +I+ + KYV+ ++ A ++G+ L +A PK+ P + N R Q+ L+ +L TA Sbjct: 15 GPATVGVAPSTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTCFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYGGQGDGTWPHPAVHLTVSTE-PGKDIETRTYISAPVGVTAERAADSAAFIPVPYEIRYSEAERNGLEAIAQARDAEDRASSLFTDIETLEKSIEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLNALALAPKVDPADIESDFNKHIQDVLVVSYLANTIRTQMELSNRLATA 303
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_MALGO (Eukaryotic translation initiation factor 3 subunit F OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_1945 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.162e-33 Identity = 96/264 (36.36%), Postives = 142/264 (53.79%), Query Frame = 1 Query: 19 KKIRMAASDRTVLQFGPSSAA---TSNVTA-KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGF---RNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKS------TSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLP 759 +K +AAS L F P+++ + ++TA KVHP+ +F+I D Y+RR RVIGTLLG+ + V++RN++ VPH E D Q+ LD E+H ML HL+V P EV++GW+ST + SALI + Y RE +HLT++T NG G V+ YVS L + F +P L M E+ L + T +D L + LE ++ ++R+LT YV + G D +VGR LS+T+ +P Sbjct: 3 EKSTLAASSALHLSFPPAASGVFHSRSITAVKVHPVALFSILDHYLRRDVSQPRVIGTLLGT-RSESEVEVRNAFAVPHGESQDPWQIHLDAEHHRRMLDLHLRVRPDEVVLGWYSTNTELNSNSALIQDHYSRETAPHQAIHLTLNTNVADEANGLG-VQCYVSALLGAMAKPEDCAFLSLPTHLLMSTPEQTALRHLAAPKPQNITDLDALKASLEDVQAKLDRVLT-------YVRRVLAGEVEGDKAVGRYLSDTIGVVP 257
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_SCHPO (Eukaryotic translation initiation factor 3 subunit F OS=Schizosaccharomyces pombe GN=eif3f PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.370e-32 Identity = 93/300 (31.00%), Postives = 151/300 (50.33%), Query Frame = 1 Query: 31 MAASDRTVLQFGPSSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV----------PNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQL-AAQFQEIPLDLRMIEAERVGFDILKSTSVD-----KLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLN 876 MA + VL S+ +S + + P V+F+I D R+ + +RVIGTLLG+ DG ++I++ + VPHNE S+QV +++EYH M HLK NP+EV+VGW++T + SALI Y P+P VHLTV+T + +K YVS + + +R + F P +R EA R G + + D L +DL+ + LL++I + YV + ++G + + +VGR L + + +P + F+K+ + R Q+ +A +LN Sbjct: 1 MALGTKHVLHLTKPSSRSSPLNIVIEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQVEVEMEYHRAMYHLHLKANPREVVVGWYATSPDLDAFSALIQNLYASPAEPGTAPLGTYPHPCVHLTVNTDV-SSPLAIKTYVSSPVGITERLADSCAFVPTPFTIRDDEAVRSGLKAVAAPKNDPSRLASLFTDLQQLRRSTLELLSMIERVSDYVQNVIDGSSPANVAVGRYLMKCFSLIPCVEGQDFEKIFSSHLQDVLVVVYLANTLRTQVDIASRLN 299
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.241e-31 Identity = 85/265 (32.08%), Postives = 139/265 (52.45%), Query Frame = 1 Query: 103 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDT---GFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPK-LSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKL 873 VHP+ +F+I D Y+RR D RVIGTLLG+ + ++I+N + VPH E ++ QV +D+EYH +M + KV P EVIVGW++T + SALI +FY RE VHLT+DT G + +K+Y+S L + F +P +L E +L S ++ +DL+ + V ++++ + ++ + YV + G D +VGR L++T++ +P L + L N + R Q ++ +L Sbjct: 34 VHPVALFSILDHYLRRNDGQHRVIGTLLGT-RTESEIEIKNCFAVPHLEDAEEGQVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGIKSYISSPLGATPKAENCVFLPLPTNLLHSTPEHSSLSLLASQNISSPLTDLDALAVSLKQVQSQLDRVLTYVRAVISGEKEGDKAVGRFLNDTISVVPAGLDDNKLETLFNAHLQDVLMVSYLANVVRAQAEVSSRL 297
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROWI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila willistoni GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29 Identity = 74/268 (27.61%), Postives = 142/268 (52.99%), Query Frame = 1 Query: 103 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPD-GTVDIRNSYVVPHNEF--SDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTS------VDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKL 873 + PLV+ +I D Y RRP +VIGTLLG P+ G ++I N + + H ++ SD++ +D++Y + M + + PQE I+GW++TG V+ + +HE+Y RE NP+HL +DT R ++ Y +V + + + F +P+++ E V +++K + V ++ +L + + L T ++ + +YV++T+ + P+N+VGR L + + S+P + +F + N + + QL ++E + Sbjct: 13 LQPLVLLHIIDAYERRPKDCTQVIGTLLGRNNPESGHLEISNCFTLLHKDYPNSDRIDVDLQYANDMYELNQLTYPQEKIIGWYATGKEVSRSAVNLHEYYARECADGNPMHLLIDTSLRGQRMMMRLYTAVVMGVPNGTKGLMFSLLPVEMSSGNPESVALNLMKKNALQPTKQVGRILPELVQVVDITRDLQTKLDLVLRYVNETLARKRTPNNTVGRALHDALTSVPLVDAESFRMMFNANVRDMLMSITLATMIKAQLKISESV 280
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROAN (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila ananassae GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29 Identity = 85/276 (30.80%), Postives = 138/276 (50.00%), Query Frame = 1 Query: 88 NVTAKV--HPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK--------LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKL 873 N+ AKV PLV+F I D Y RRP A ++IGTLLG + I N + V H E D ++ LD+ Y + ML+ + PQE ++GWFSTG V+ + L+H++Y RE + P+HL VD + + + Y V + + F +PL++ AE V +++ ++ LP ++ +E E L L + + +Y++D + + PDN VGR L +T+ S+P + F + N + + QL ++EKL Sbjct: 6 NLQAKVVLQPLVLFQIIDSYERRPKDATQIIGTLLGRS-NGKEITITNCFTVLHKEHPDSARIDLDLGYANDMLELNQLTYPQEKVLGWFSTGKSVSRSALLLHDYYSRECSDGQPLHLLVDATLKGQRLSTRLYCGVEMGVPGGTKGLMFSLVPLEMASDSAEMVALRLMQKQNLQPGAKQVGRILPELVQVVEATRELQLRL-DLVLRYINDVLARKRRPDNVVGRALHDTLTSVPLVDTDNFKLMFNANVRDMLMAITLSTMIKTQLQISEKL 279
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROME (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila melanogaster GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.931e-28 Identity = 78/276 (28.26%), Postives = 137/276 (49.64%), Query Frame = 1 Query: 88 NVTAKVH--PLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLIND-------IYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLN 876 ++ AKV+ PLV F I D Y RRP +V+GTLLG +G ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + F +PL++ ++ V ++ S + +E + +++ D + +Y++D + + PDN VGR L + ++P L F + N + + QL ++EKL+ Sbjct: 6 SMRAKVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRN-KEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROER (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila erecta GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.530e-28 Identity = 75/269 (27.88%), Postives = 133/269 (49.44%), Query Frame = 1 Query: 103 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDI-------YKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLN 876 + PLV+F I D Y RRP +VIGTLLG +G +I N + VPH E + ++ LDI Y +L+ ++ P E ++GWF TG V+ ++L+H++Y RE P+HL VD ++ + + Y +V + + F +PL++ ++ V ++ S+ + L+ + +++ DI +Y+ D ++ + PDN VGR L + ++P + P F + N + + QL ++EKL+ Sbjct: 13 IKPLVLFQIIDSYERRPKGDNQVIGTLLGRN-KEGHFEITNCFTVPHKEHPEINRIDLDIAYASEILELNMLTYPNERVLGWFCTGKSVSRSASLLHDYYARECGEVQPLHLVVDATLKSQRLSTRLYCAVEIGVPGGTKGLMFSLVPLEISNGNSDLVALRSIEKQSLQQGTKQLDRFIPELVQVVDATRDIQQRLDLVLRYIKDVLDRKRKPDNVVGRALHAALTAVPVMDPDKFRLMFNTNLRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila simulans GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.528e-28 Identity = 75/267 (28.09%), Postives = 131/267 (49.06%), Query Frame = 1 Query: 109 PLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV--PNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDI-------YKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLN 876 PLV+F I D Y RRP +V+GTLLG D ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++Y RE P+HL VD +N + + Y +V + + F +PL++ ++ + ++ S + +E + +++ DI +Y++D + + PDN VGR L + ++P L F + N + + QL ++EKL+ Sbjct: 15 PLVLFQIIDAYDRRPKGDNQVMGTLLGRNKEDH-IEITNCFTVPHKEHSENKRIDLDMTYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECGERQPLHLLVDASLKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISSENSDLLAMRCIEKQSQQQASKQMERFAPELVQVVDATRDIQQRLDLLLRYINDVLARKKKPDNVVGRSLQAALTAVPLLDSEKFRLMFNTNLRDMLMAITLSTMIKTQLEISEKLS 280
BLAST of FC877937 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPS (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.455e-27 Identity = 80/282 (28.37%), Postives = 138/282 (48.94%), Query Frame = 1 Query: 73 SAATSNVTAKV--HPLVIFNICDCYVRRPDQAERVIGTLLGSVL-PDGTVDIRNSYVVPHNEFSDQ---VALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDL-----RMIEAERVGFDILKST-SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRNQLSLAEKLN 876 S + N+ +KV HPLV+F I D Y RR V+GTLLG+V G ++I N + V H D + LD++Y + ML+ PQE ++GWFSTG V+ + +HE+Y R+ N P+HL +DT R + + +V + F +P+D+ ++ +G + T +L +LE + + + ++ + +Y++D + + PDN+VGR L + + S+P + F + N + + QL L+E+L+ Sbjct: 2 SLSNFNLQSKVLLHPLVLFQIIDAYERRAKDVPEVLGTLLGTVAGKTGRIEITNCFSVVHRMHGDNNCHIDLDLKYDNDMLELAQIAYPQEKVLGWFSTGKSVSAAAVELHEYYERQCHNGQPLHLLMDTSLRGQRMNTRIFCAVATGVPGGTKGLMFSLLPMDIYFGSPDIVAMRHMGRQCAQPTKDAGRLLPELEQVVDATKDIQQKLDLVLRYINDILNRKRRPDNTVGRALHDVLTSVPMVEAERFRHMFNTNMRDLLMSLTLSSMIKTQLQLSERLS 283 The following BLAST results are available for this feature:
BLAST of FC877937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877937 ID=FC877937; Name=FC877937; organism=Citrus clementina; type=EST; length=884bpback to top |