FC877938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877938 vs. ExPASy Swiss-Prot
Match: OBPAL_CANAL (Oxysterol-binding protein-like protein OBPalpha OS=Candida albicans GN=OBPALPHA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15 Identity = 67/218 (30.73%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 154 LEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYI------------GADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWAL-SIYFAYRRAWKPFNPVLGETF-----EMVNHGGVTFIAEQVSHHPPMSAGH--AENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTL-KRDGVVLDLVPPPTKVHNLIFGR 744 L+ + + ++ED ED++ G K + D+ ++ +Y G D+ S +TLP FI E S+L+R+ + LL ++ EDP R + W L S + + + KP NPVLGE F E+ N+ +++EQ+SHHPP S+ E D +++FLGNS G VTL K D V + P V ++FG+ Sbjct: 7 LDKLKLKTTSEDIEDDS--GHAKPDNSDDIDEVDSEYQNILLSIIAQLRPGMDL-SKITLPTFILEKKSMLERITNFFQIPKLLIDSNSIEDPLDRFIGVLRWYLASWHISPKAVKKPLNPVLGEVFTCYWDELPNNKSAYYLSEQISHHPPKSSYFYIMPEEKIRVDGVVIPKSRFLGNSSAAIMEGCGYVTLGKWDNEVYVMNQPNVYVRGILFGK 221
BLAST of FC877938 vs. ExPASy Swiss-Prot
Match: OBPA_CANAL (Oxysterol-binding protein-like protein OBPa OS=Candida albicans GN=OBPA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12 Identity = 56/186 (30.11%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 283 SLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWAL-SIYFAYRRAWKPFNPVLGETF-----EMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKL--------RTKFLGNSIDVYPVGRTRVTL-KRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTG 795 S +TLP FI E S+L+R+ + +L A+ D R V +W L S + A + KP NPVLGETF + + +I+EQVSHHPP S+ +F +K+ +++FLGNS G +TL + + V ++ P ++FG+ ++ M + TG Sbjct: 63 SRITLPTFILEKKSMLERITNFFQIPDMLLKANRTSDDVERFVSVLAWYLASWHIAPKAVKKPLNPVLGETFNCYWENISDDCSAYYISEQVSHHPPKSS------YFYLVPEAKIKVDGILIPKSRFLGNSSAAMMEGWAHLTLGEHENEVYEMNQPNVYCRGILFGKMKMELGDHMYVKCRKTG 242
BLAST of FC877938 vs. ExPASy Swiss-Prot
Match: YJX1_SCHPO (Oxysterol-binding protein homolog C23B6.01c OS=Schizosaccharomyces pombe GN=SPCC23B6.01c PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12 Identity = 55/176 (31.25%), Postives = 74/176 (42.05%), Query Frame = 1 Query: 283 SLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLV-----YASSWALSIYFAYRRAWKPFNPVLGETFE---------------MVNHGGVTFIAEQVSHHPPMSAGH--AENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGR 744 S VT P F+ EP S+L+R+ M + LL + DP MR + Y S W + R KP NP+LGETF HG + AEQV HHPP+SA D K R++FLGNS G + L+ + P ++FG+ Sbjct: 45 SKVTFPTFVLEPKSMLERITNFMSHPDLLLNVQKTADPEMRFLDVVRFYMSGW----HIRPRGVKKPLNPILGETFTGFWKFPPSNSKDPNLQKLHGIAVYAAEQVCHHPPISAYFYLCPEYKVRIDGVVKPRSRFLGNSAASIMEGIASIKLQDLDEEYLITQPNVYARGILFGK 216
BLAST of FC877938 vs. ExPASy Swiss-Prot
Match: OSH6_YEAST (Oxysterol-binding protein homolog 6 OS=Saccharomyces cerevisiae GN=OSH6 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11 Identity = 56/182 (30.77%), Postives = 84/182 (46.15%), Query Frame = 1 Query: 289 VTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETF----EMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLR--------TKFLGNSIDVYPVGRTRVTLK--RDG----VVLDLVPPPTKVHNLIFGRTWIDSPGDMVM 777 +TLP FI E S+L+R+ +++ L A +DP R +Y W L+ + A + KP NPVLGE F ++ N +I+EQ SHHPP E +F S +R ++FLGNS G T + +DG L P V ++FG+ I+ M++ Sbjct: 67 ITLPTFILEKKSMLERVTNQLQFPEFLLQAHSEKDPLKRFLYVMKWYLAGWHIAPKAVKKPLNPVLGEYFTAYWDLPNKQQAYYISEQTSHHPP------ECAYFYMIPESSIRVDGVVIPKSRFLGNSSAAMMDGSTVLQFLDIKDGNGKPEKYVLTQPNVYVRGILFGKMRIELGDHMII 242
BLAST of FC877938 vs. ExPASy Swiss-Prot
Match: OSH7_YEAST (Oxysterol-binding protein homolog 7 OS=Saccharomyces cerevisiae GN=OSH7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11 Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 1 Query: 100 TIGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETF----EMVNHGGVTFIAEQVSHHPPMSAGH--AENEHFIYDVTSKLRTKFLGNS 636 ++ ++ S+NG+ N + S D +D Q N ++ G D+ S +TLP FI E S+L+R+ +++ +L A +D R V +W L+ + R KP NP+LGE F ++ N +IAEQ SHHPP SA + D ++KFLGNS Sbjct: 11 SLTNSSHSSINGIAS----NAANSKPSGADTDDIDENDESGQSILLNIISQLKP--GCDL-SRITLPTFILEKKSMLERITNQLQFPDVLLEAHSNKDGLQRFVKVVAWYLAGWHIGPRAVKKPLNPILGEHFTAYWDLPNKQQAFYIAEQTSHHPPESAYFYMIPESNIRVDGVVVPKSKFLGNS 189 The following BLAST results are available for this feature:
BLAST of FC877938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877938 ID=FC877938; Name=FC877938; organism=Citrus clementina; type=EST; length=806bpback to top |