FC877965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN1_RAT (Presenilin-1 OS=Rattus norvegicus GN=Psen1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 52/174 (29.89%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A +E Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIVSSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNE 280
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN1_DANRE (Presenilin-1 OS=Danio rerio GN=psen1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15 Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 LVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 L+Y +D+ T Q+ ++LNA++ + +I ++T +LV+LY Y ++ ++ FS +L +D FT ++++NF +VG++ + G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A +E Sbjct: 102 LIYTPFREDTETVGQRALHSMLNAIIMISVIVVMTLVLVVLYKYRCYKVIQAWLFFSNLLLLFFFSLIYLGEVFKTYNVAMDYFTLALIIWNFGVVGMICIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAAISVYDLLAVLCPKGPLRILVETAQERNE 269
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN1_CANFA (Presenilin-1 OS=Canis familiaris GN=PSEN1 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15 Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L +D T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A +E Sbjct: 107 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFLFSFIYLGEVFKTYNVAMDYITVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNE 279
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN2_XENLA (Presenilin-2 OS=Xenopus laevis GN=psen2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15 Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 100 LVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 L+Y +D+++ ++L +VLN L+ + +I ++T LVLLY Y F+ ++ S+ +L +D T F++++NF VG++ + G P+ L+QAY++ + +MA F K LPEW+ W P GPL++LVE A +E Sbjct: 122 LIYTPFSEDTTSVGERLLNSVLNTLIMISVILVMTIFLVLLYKYRCYKFIHGWLILSSLMLLFMFTYIYLSEVFKTYNIAMDYPTLFMVIWNFGAVGMICIHWKG-PLQLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLLAVLCPKGPLRMLVETAQERNE 289
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN1_BOVIN (Presenilin-1 OS=Bos taurus GN=PSEN1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.745e-15 Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 R L+Y +D+ T Q+ ++LNA++ + +I I+T LLV+LY Y + ++ S+ +L +D + +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A +E Sbjct: 109 RKDGQLIYTPFTEDTETVAQRALHSILNAVIMISVIVIMTILLVVLYKYRCYKVIHAWLIVSSLLLLFFFSFIYLGEVFKTYNVAMDYISVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNE 281
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN2_RAT (Presenilin-2 OS=Rattus norvegicus GN=Psen2 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 LVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 L+Y +D+ + Q+L +VLN L+ + +I ++T LV+LY Y F+ ++ S+ +L +D T F+ ++NF VG++ + G P++L+QAY++ + +MA F K LPEW+ W P GPL++LVE A +E Sbjct: 119 LIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLLFLFTYIYLGEVFKTYNVAMDYPTLFLAVWNFGAVGMVCIHWKG-PLVLQQAYLIVISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNE 286
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN2_MOUSE (Presenilin-2 OS=Mus musculus GN=Psen2 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 LVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 L+Y +D+ + Q+L +VLN L+ + +I ++T LV+LY Y F+ ++ S+ +L +D T F+ ++NF VG++ + G P++L+QAY++ + +MA F K LPEW+ W P GPL++LVE A +E Sbjct: 119 LIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFLAVWNFGAVGMVCIHWKG-PLVLQQAYLIVISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNE 286
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN1_CHICK (Presenilin-1 OS=Gallus gallus GN=PSEN1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 49/174 (28.16%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 R L+Y +++ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L +D T ++++NF +VG++ + G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A +E Sbjct: 109 RKDGQLIYTPFTEETDTIGQRALNSILNAAIMISVIIVMTILLVVLYKYRCYKVIHGWLIISSLLLLFFFSFIYLGEVFKTYNVAMDYITVALIIWNFGVVGMICIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNE 281
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN_DROME (Presenilin homolog OS=Drosophila melanogaster GN=Psn PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 45/155 (29.03%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 139 KLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDEE 600 K A+ N+L+ + ++ ++TFLL++LY + ++ S+F +L P+D T ++++NF +VG++S+ G P+ L+Q Y++ + +MA F K LPEWT W P GPL++LVE A +E+ Sbjct: 150 KFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFTYLYLEELLRAYNIPMDYPTALLIMWNFGVVGMMSIHWQG-PLRLQQGYLIFVAALMALVFIKYLPEWTAWAVLAAISIWDLIAVLSPRGPLRILVETAQERNEQ 303
BLAST of FC877965 vs. ExPASy Swiss-Prot
Match: PSN2_PIG (Presenilin-2 OS=Sus scrofa GN=PSEN2 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 LVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASTPDE 597 L+Y +D+ + Q+L +VLN L+ + +I ++T LV+LY Y F+ ++ S+ +L +D T F+ ++NF VG++ + G P++L+QAY++ + +MA F K LPEW+ W P GPL++LVE A +E Sbjct: 119 LIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLITSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKG-PLVLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNE 286 The following BLAST results are available for this feature:
BLAST of FC877965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877965 ID=FC877965; Name=FC877965; organism=Citrus clementina; type=EST; length=617bpback to top |