FC877974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 8.426e-83 Identity = 153/271 (56.46%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ +M++VY KF L + DF GH++ALY +D Y++QP +ET+NRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.426e-83 Identity = 153/271 (56.46%), Postives = 206/271 (76.01%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS++ +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ + +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.101e-82 Identity = 155/265 (58.49%), Postives = 200/265 (75.47%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE+AS+ +E L+K++ N+ PG P GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E+D + +G++ M+EVY KF L + DF GH++ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRF-NI-PGAPP-ASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQP--CCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 306.22 bits (783), Expect = 1.437e-82 Identity = 153/265 (57.74%), Postives = 200/265 (75.47%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+D+N +YGGE+AS+ +E L+K++ PG+ P GR DWN+DL+PK LM+NG+L +L+ T+VTRY++FK I GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E D + +G++ +M++VY KF L + DF GHS+ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFK--LPGQPP-ASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQP--CCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.437e-82 Identity = 153/265 (57.74%), Postives = 200/265 (75.47%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+D+N +YGGE+AS+ +E L+K++ PG+ P GR DWN+DL+PK LM+NG+L +L+ T+VTRY++FK I GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E D + +G++ +M++VY KF L + DF GHS+ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFK--LPGQPP-ASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQP--CCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3) HSP 1 Score: 306.22 bits (783), Expect = 1.437e-82 Identity = 154/265 (58.11%), Postives = 199/265 (75.09%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE+AS+ +E L+K++ PG P GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E+D + +G++ +M+EVY KF L + DF GH++ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKI--PGAPP-ASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQP--CCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 7.887e-81 Identity = 152/265 (57.36%), Postives = 196/265 (73.96%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG+++V G KVLH+DRN +YGGE+AS+ +E L+K++ PG P GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E D + +G++ + EVY KF L + DF GH++ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKI--PGAPP-ASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQP--CCETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.150e-29 Identity = 79/294 (26.87%), Postives = 142/294 (48.30%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVNIEALFKKYGN-VQP------GEEPWKKYGRVND-----WN------------IDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALY-PSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEV 825 +D++ ++D+VV+GTG TE ++ S G VLH+D N++YG +S +++AL + V+P W + ++ WN +DL P++L + GEL +L+ +++ RY EF+ + ++ + VP + + + + EKR KFL ++ ED + L T E + + + ++A+ PS + E + R + ++ S+ RYG +P+++P+YG GELPQ F RL A+YGG Y L +D++ Sbjct: 2 LDDLPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHN----GEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGED-KCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSF-------EEGMQRTQRFLGSLGRYGNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDI 283
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: RAE2_HUMAN (Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.368e-23 Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 247 WNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYV-QQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYML 804 +NIDLV KLL S G L ++L+ +DV+RY+EFK + ++GK V +VP + S + M EKR KFL + E+++ C+ E L N + F+ HS+A+ ++ +N + ++ + R+G +P+++PLYG GE+PQGF R+ A++GG Y L Sbjct: 229 FNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGK-----VEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQHPDEYQA---FRQCSFSEYLKTKKLTPNLQHFVLHSIAMTSESSC-----TTIDGLNATKNFLQCLGRFGNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCL 402
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: RAEP_CANAL (Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.799e-23 Identity = 82/277 (29.60%), Postives = 139/277 (50.18%), Query Frame = 1 Query: 43 DVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVNIEALFKKYGNVQ--------------PGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVY--DKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLY-GLGELPQGFARLSAIYGGTYMLNTDIDE 822 DV+++GTGL E +L+ LS +G +VLHID N +YG +++ IE L K G+V PG + +Y D+ IDL PK++ +L ++L+ + V RYLEF+ ++ +V + + V + + + KR KFL +F D Q + + T +V+ +F LE+ + + +S+ L Y Q + + + R++ +++S YGK P + + G GEL QGF R +A+ G TY LNT++ + Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKIHQFQDAQIYIPGGKQSNQY-TSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQ--DIFTDKSLSLMTKRYLMKFL----KFLLLDPDYKQRVKPYADTPIQVFLQQEFKLEEPQINELVYSIGL----SYKEQT-STKQALIRMKRFLSSFDVYGKFPCMVSKFGGPGELSQGFCRSAAVAGTTYKLNTNLTD 269 The following BLAST results are available for this feature:
BLAST of FC877974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877974 ID=FC877974; Name=FC877974; organism=Citrus clementina; type=EST; length=829bpback to top |