FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PARUW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Protochlamydia amoebophila (strain UWE25) GN=gatA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 SA EI Q G++S+ A+T + R A Q QA+ +AK LD+ L +P+G L G+PI+IKD VKG+ +T G +F+ + + + ++E LL GAVI KTN+ + M ++N+ +T NP N T GGSSGG A VA + SPL +G+D GS+R+P+ CG GF+PT RV Sbjct: 5 SAIEIRDQFIRGDVSASAITQHYLNRIAKYDQKIGAFLSVYEEQAMMQAKQLDQK-RLANQPLGKLAGIPIAIKDNILVKGEISTCGS-KFLTNFKSPYQASVIEYLLAEGAVIIGKTNMDEFAMGSSTENSALQKTSNPWNLKCTPGGSSGGSAAAVAGRLSPLSLGSDTGGSVRLPASFCGVVGFKPTYGRV 196
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9605) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.765e-24 Identity = 68/188 (36.17%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 315 RQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +QL++GE+SS + KR ++ + E QA A +DE G+ +GPL GLP++IKD KG +TT ++ S + E L + G V+ KTN+ + M G ++ + FG T NP NT+ GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 13 QQLQSGEVSSRELVDQHLKRLESSEPSLNAFVEVTADQARAEASRIDE-ARAAGEALGPLAGLPLAIKDNLCTKGVRTTCSS-RMLEQFVPPYESTVTERLWQAGGVLVGKTNLDEFAMGGSTETSAFGATQNPWNTAHVPGGSSGGSAAAVAAGSCVASLGSDTGGSIRQPASFCGVVGLKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THEFY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermobifida fusca (strain YX) GN=gatA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.014e-23 Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+ + +GE S++ T A+ R A +ALE+A+ +D G+ +GPL G+P++ KD F K TTA + ++ + ++ + E L + G VI KTN+ + M ++N+ +G T NP +T GGSSGG A VA +PL GTD GSIR P+ CG G +PT Sbjct: 8 SAAELGAAIASGETSAVEATQAYLDRIAEVDGQIHAFLHVAADKALEQARAVDAR-RAAGEKLGPLAGVPVAHKDVFTTKDMPTTAAS-KILEGWQSPYDATVTERLRDAGLVILGKTNLDEFAMGSSTENSAYGPTRNPWDTDRVPGGSSGGSSAAVAAFEAPLATGTDTGGSIRQPAAVCGLVGAKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: Y1954_ARCFU (Putative amidase AF_1954 OS=Archaeoglobus fulgidus GN=AF_1954 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.259e-23 Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVP 881 A +I +LK GE+ + ++ + T+ +A+E AK D PL GLPI+IKD + +G +TT +F ++ E++ LVE L + GAVI KTN+P+ + +DN +FG T NP + S T GGSSGG A VA P+ G D GSIRIP+ CG YG +P+ RVP Sbjct: 4 AVDIVEKLKGGEIKPAELVEECLEKIERLNPKINAFV-TLNEKAIEEAKKADVST--------PLAGLPIAIKDNVETRGIRTTY-CSKFYENYVPEEDAVLVERLKKAGAVIIGKTNMPEFGLIAYTDNPMFGPTRNPWDLSRTVGGSSGGSAAAVAAGILPVASGNDGGGSIRIPASFCGLYGLKPSFGRVP 187
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_RHOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopirellula baltica GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23 Identity = 67/195 (34.36%), Postives = 103/195 (52.82%), Query Frame = 3 Query: 294 NSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +SA+EI +QL +GE++++ V +Q + T A++ A+ +D + GK +GPL GLP++IKD TT + ++ ++ +V L GA++ KTN+ + M ++ + G T NP +T+ T GGSSGG A VA PL +GTD GSIR P+ CG G +PT RV Sbjct: 3 HSASEILKQLDSGEVTAVEVIAQSLAAIRASQPTINAFTHVAEETAMQAAEAVDADRKA-GKTLGPLAGLPVAIKDVLCTSDMPTTCSS-KMLEGFVPPYDATVVARLKSAGAIVVGKTNMDEFAMGASTETSAMGVTGNPWDTTKTPGGSSGGAAAAVAAGAVPLSLGTDTGGSIRQPAAFCGITGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_STRAW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces avermitilis GN=gatA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.121e-22 Identity = 69/201 (34.33%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 282 ITETN------SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 +T+TN +A EIA ++ +GEL+++ VT A R + AL +A+ +DE E G+ +GPL G+P+++KD F +G TT G + ++ ++ L + L VI KTN+ + M ++N+ +G T NP + S GGS GG A +A +PL +GTD GSIR P+ GT G +PT Sbjct: 1 MTDTNVNIIRLTAAEIAAKVASGELTAVQVTEAHLARIDAVDEKVHAFLHVDREGALAQARAVDEKRE-RGEKLGPLAGVPLALKDIFTTEGIPTTVGS-KILEGWIPPYDATLTKKLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLSRIPGGSGGGSSAALASFEAPLAIGTDTGGSIRQPAAVTGTVGVKPT 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: FAH2B_DANRE (Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 67/198 (33.84%), Postives = 109/198 (55.05%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYL--ELHGKPV----GPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T SA ++A +++ GE+SS+ V A+ R L + L + FS AL A D+ + E G+ V PL G+P+S+K+ F ++G + G K A+ + + V +L GA+ TN + M +S+N+++G T NP+N GGSSGGEG+++ S G+G+D+ GSIR+P G +G +P+ Sbjct: 47 TLSAVQLAEKIRRGEVSSVEVVQAYIDRIQEVNPLLNALIKDRFSAALLEAARADKLIKEENGGEEVLRNQFPLLGVPMSVKESFGLQGMPNSGGLKSRGKVLASVD-APPVALLKRAGAIPLGVTNTSELCMWMESNNHLYGITSNPYNLERICGGSSGGEGSIIGGGASVFGIGSDIGGSIRMPCFFNGIFGHKPS 243
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DESDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22 Identity = 72/195 (36.92%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVG-PLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S T +A+ L+ ELS++ VTTA R + + L AL RA LD G PL G+P+++KD F +G TTAG ++ ++ V+ L E GAVI KTN+ + M ++N+ F T NP N + GGSSGG A V +GTD GSIR P+ CG G +PT RV Sbjct: 8 SLTAVAQALQKKELSAVDVTTACLDRITATEPHLAALLYVNAENALARATTLDS----EGPDAARPLWGVPVTLKDAFSTRGMPTTAGS-RMLEGYTPFYDAFAVQKLHEAGAVILGKTNLDEFAMGSSTENSAFKVTRNPWNLNKVPGGSSGGSAASVTAGQCFASLGTDTGGSIRQPASFCGCVGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_STRCO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces coelicolor GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22 Identity = 64/190 (33.68%), Postives = 102/190 (53.68%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 +A EIA ++ +GEL+++ VT A R + AL +A+ +DE E G+ +GPL G+P+++KD F +G TT G + ++ ++ + + L VI KTN+ + M ++N+ +G T NP + + GGS GG A +A +PL +GTD GSIR P+ GT G +PT Sbjct: 8 TAAEIAAKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRE-RGEKLGPLAGVPLALKDIFTTEGIPTTVGS-KILEGWIPPYDATVTKRLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLTKIPGGSGGGSSAALAAFQAPLAIGTDTGGSIRQPASVTGTVGVKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SALTO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22 Identity = 66/190 (34.74%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+A + GE S++ VT A R + AL+ A+ +D G+P+GPL G+P+++KD KG TTAG + + +S +V L G V+ KTN+ + M ++ + FG T NP + S GGS GG A +A +PL +G+D GSIR P GT G +PT Sbjct: 8 SAAELAGLVARGESSAVEVTQAHLDRISAVDDRVHAFLHVDTEGALDAARDVDSR-RAAGEPLGPLAGVPVAVKDVLTTKGVPTTAGS-KILADWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSSAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPT 195 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |