FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CHLFF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila felis (strain Fe/C-56) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19 Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+ + +GE S+ A+ F R +A E+A +D E G+P+G L G+PI IKD V G +TT + A + + + I E G +I K N+ + M + + F T NP + S GGSSGG A V+ + P+ +G+D GSIR P+ CG GF+P+ Sbjct: 5 SALELRNSVVSGESSATAIAEYFYNRIETEDSRIGAFLSLCKERAYEKAAIVDAKRE-RGEPLGKLAGVPIGIKDNIHVTGLRTTCASKMLENYIAPFDATVIKRIEAEDG-IILGKLNMDEFAMGSTTQYSAFHPTKNPWDLSCVPGGSSGGSAAAVSARFCPMALGSDTGGSIRQPAAFCGVVGFKPS 192
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNY3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechocystis sp. (strain PCC 6803) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 66/185 (35.68%), Postives = 100/185 (54.05%), Query Frame = 3 Query: 315 RQLKTGELSSLAVTTA-FAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 +QL E+S++AV A A+ A+ +L S L T QA+ +A+ +D + G+P+G L G+PI IKD KG TT + ++ S + E L + GAV+ KTN+ + M ++N+ + T NP + + GGSSGG A VA + +G+D GSIR P+ CG G +PT Sbjct: 9 QQLIDQEISAVAVAQASLARIEAVDDRLKSFLQVTA-PQAIAQAEKVDAQIAA-GEPIGLLAGIPIGIKDNLCTKGIVTTCAS-QILRGFVPPYESTVTEKLQKAGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLTRVPGGSSGGSAAAVAADECLIALGSDTGGSIRQPASLCGVVGMKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH8102) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 3 Query: 315 RQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 ++L+ G +SS + +R ++ + E +A A +D+ G+ +GPL GLP++IKD +G +TT ++ S + + L GAV+ KTN+ + M G ++ + FG T NP N GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 8 QRLQAGGVSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQ-ARAAGEDLGPLAGLPLAIKDNLCTRGVRTTCSS-RMLEQFVPPYESTVTDRLWGAGAVLVGKTNLDEFAMGGSTETSAFGATKNPWNIEHVPGGSSGGSAAAVASGSCLASLGSDTGGSIRQPASFCGVVGLKPTYGRV 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNJB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 3 Query: 315 RQLKTGELSSLAVTTAFAKRAA-IAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 RQL T E S+ + + +R A + QL S +T T AL++A+ +D + G+ +GPL G+P+++KD +G +TT ++ S + L G V KTN+ + M ++N+ F RT NP + + GGSSGG A VA + + +G+D GSIR P+ CG G +PT Sbjct: 9 RQLVTKERSAEEIAREYLERLAQLEPQLKSFITVTE-ELALQQARAVDARIRA-GEAIGPLAGIPLAVKDNLCTQGIRTTCAS-RMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFAMGSSTENSAFQRTANPWDLTRVPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGVVGLKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 62/192 (32.29%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 306 EIARQLKTGELSSLA-VTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ +++ G ++S A V + F + A+ + + S +T M ALE A+ DE ++ + L G+P+++KD + +G +TT G + + + ++ +V L E GAV KTN+ + M ++ + +G T NP + GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 10 ELQNKIRQGGVTSTAIVNSVFGRIDAVEENVHSYIT-LMRESALEEAQKADE--QIRTGEINALTGIPVALKDIYCTRGVRTTCGSL-ILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFTRNPWDLERIPGGSSGGSAAAVAADECIAALGSDTGGSIRQPAALCGVVGMKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PELCD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 65/191 (34.03%), Postives = 89/191 (46.60%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ LK E+SS +T AF R A Q AL+ A+ D L L G+P+++KD F +G +TT + + + V L E AVI K N+ + M ++N+ FG NP N GGSSGG A VA + + +GTD GSIR P+ CG G +PT RV Sbjct: 10 ELQALLKNREISSRELTQAFLTRIADTDQRIGAFITQSEEAALKNAEAADARLAAGN--AASLTGIPLALKDIFITEGMRTTCAS-RILDNFVPPYSGTAVRKLQEQDAVILGKLNMDEFAMGSSNENSAFGTVKNPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_NEOSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neorickettsia sennetsu (strain Miyayama) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 66/197 (33.50%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNP----HNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADR 875 S ++ L E+SSL + A + T+ L +A +RAK DE L+ G+ V L G+P IKD + KG +TTA +++ T S + L++ GAV+ K N+ + M + ++ FG NP L GGSSGG A VA SP +G+D GS+R P+ CG G +PT R Sbjct: 8 SVAKMHLALARREISSLELVEAHLLQIRERNAHTNALILVTEEEARQRAKLADERLK-RGESVNTLTGIPCVIKDMYCTKGVRTTAAS-RALRNFVPTYESTVTSKLIDAGAVMLGKANMDEFAMGSSNTSSFFGPVKNPLKGKKGVDLVPGGSSGGSAAAVADYYSPFSLGSDTGGSVRQPASFCGLVGLRPTYGR 202
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_MYCA9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 A +A + +GE+SS+ VT A + A + QAL AK +D+ + P G L G+P+++KD F + TT G + +++ ++ + L G I KTN+ + M ++N+ +G T NP + GGS GG A +A +PL +GTD GSIR P+ T G +PT Sbjct: 9 AAALAALIHSGEVSSVEVTRAHLDQIASTDETYRAFLHVAGEQALAAAKDVDDAIAAGSVPSG-LAGVPLALKDVFTTRDMPTTCGS-KILENWVPPYDATVTARLRGAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWDVERVPGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTATVGVKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DEIRA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus radiodurans GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 63/194 (32.47%), Postives = 103/194 (53.09%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +A ++AR +++GE + + RA + L + ++ + S A E+A + ++ G+ + PL G+PI +KD V G +TT G + + + + + L GAVI K N+ + M ++++ G TLNP + GGSSGG VA SP+ +G+D GS+R P+ CG YGF+PT RV Sbjct: 6 TAAQLARAVQSGETTPQQLLHGALARAEAVRGLNALVS--LNSHAEEQAAAVQGRMQA-GETL-PLAGVPIVVKDNINVTGTRTTCGS-RMLANYVSPYTATAAQKLQGAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPAALCGVYGFKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia sp. (strain 383) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D EL G L GLPI+ KD F +G +TAG + + + + ++ +V L G V KTN+ + M ++N+ FG NP +T+ GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIEAARDLNA-FVHVDADLTLAQAKAADA--ELARGAGGALTGLPIAHKDVFVTRGWHSTAGS-KMLANYESPFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |