FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BURCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain AU 1054) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19 Identity = 67/194 (34.54%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S TE+ L E S++ + + KR A+ L + L +AK D EL G L GLPI+ KD F +G ++TAG + + + + ++ +V L G V KTN+ + M ++N+ FG NP +T+ GGSSGG A VA + +P GTD GSIR P+ G G +PT RV Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDLNA-FVHVDADLTLAQAKAADA--ELARGAGGALTGLPIAHKDVFVTRGWRSTAGS-KMLANYESPFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRV 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_KINRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 66/197 (33.50%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQ--------ALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 A ++ L+ GE+S+ VT A R TS ET AL RA+ +D G +GPL G+PI +KD KG TTAG ++ ++ +V L G V+ KTN+ + M ++++ +G T NP + + GGS GG A +A +PL +G+D GSIR P+ GT G +PT Sbjct: 13 AARLSEALRAGEVSAEEVTRAHLDRIDAVDGPTSGAGETGVHAFLHVDHEGALARARQIDAD-RAAGAELGPLAGVPIGVKDVLTTKGLPTTAGS-RMLQGWVPPYDATVVRELHAAGLVVLGKTNMDEFAMGSTTEHSAYGVTRNPWDPTRIPGGSGGGSAAALAAFEAPLTIGSDTGGSIRQPAAVTGTVGVKPT 207
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_GEOSW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus sp. (strain WCH70) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 303 TEIARQLKTGELS-SLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +E+ L+ E+S S V +F + + +Q+ + LT A +AK LD+ L G G L G+PI IKD KG +TT + + + ++ ++E L E GA+ K N+ + M ++N+ F T NP + GGSSGG A VA P +G+D GSIR P+ CG G +PT RV Sbjct: 9 SELHTLLQKKEISVSDLVDESFRRIGEVEEQVQAFLTLNE-ENARAKAKELDDKLAKEGNDFGVLFGMPIGIKDNIVTKGLRTTCAS-KILYNFDPIYDATVMERLNEAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRV 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_GEOSL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sulfurreducens GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 62/191 (32.46%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ +L E+SS+ T A R + +AL A+ D + G + PL G+P+++KD F +G +TT G + + + + +V L E GAVI K N + M +++ FG T NP N + GGSS G A +A + + +GTD GSIR P+ CG G +PT RV Sbjct: 10 ELHDKLAKREVSSVEATRALLARIEATDSRVNAYITVTPDEALAAAEAADRRIAAGG--LTPLTGVPVALKDIFVTRGIRTTCGS-KILGNFIPPYDGTVVAKLREAGAVIVGKLNQDEFAMGSSGESSAFGATKNPWNLACIPGGSSSGSAAAIAARSATATLGTDTGGSIRQPASHCGCVGLRPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_GEOMG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 66/192 (34.38%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ +LK ELSS+ T A R A+ ++ + +T T +AL A+ D + + PL G+P+++KD F KG +TT + + + + V L E GAVI K N + M +++ FG T NP N GGSS G A +A + + +GTD GSIR P+ CG G +PT RV Sbjct: 10 ELHDRLKRKELSSVEATRAMLARIEAVDPKVNAYITVTP-EEALAAAEAADR--RIAAGDMAPLTGIPVALKDIFVTKGIRTTCAS-KILDNFVPPYDGTAVAKLKEAGAVIVGKLNQDEFAMGSSGESSAFGPTRNPWNLECIPGGSSSGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLRPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CLOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 A E+ + E S VT A + + + +AL AK LDE L G+ +G L G P+ IKD VK Q T + ++ + ++ + E + G VI K N+ + M ++N+ + T NP + GGSSGG A VA K PL +GTD GS+R P+ CG G +PT RV Sbjct: 8 AHELKNLISKKEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALDEKLS-KGEDIGLLGGAPLGIKDNISVKNMQNTCAS-KILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_ANAVT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 61/190 (32.11%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 S E+ QL E S++ +T + QALE+A+ +D + G+ +G L G+PI +KD KG TT +++ S + + LL+ GAV+ KTN+ + M ++N+ + T NP + S GGSSGG A VA + + +G+D GSIR P+ CG G +PT Sbjct: 3 SIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAA-GEEIGLLAGIPIGVKDNMCTKGIPTTCAS-RILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_ANASP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena sp. (strain PCC 7120) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19 Identity = 61/190 (32.11%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 S E+ QL E S++ +T + QALE+A+ +D + G+ +G L G+PI +KD KG TT +++ S + + LL+ GAV+ KTN+ + M ++N+ + T NP + S GGSSGG A VA + + +G+D GSIR P+ CG G +PT Sbjct: 3 SIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAA-GEEIGLLAGIPIGVKDNMCTKGIPTTCAS-RILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DESPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotalea psychrophila GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18 Identity = 65/194 (33.51%), Postives = 92/194 (47.42%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S E A +L+ G++SS+ +T + +R + AL +AK D+ L+ PL G+P+SIKD VK T G + ++ A N+ +V+ L GAV K + + M S+ FG NP AGGSSGG VA + +GTD GSIR P+ CG G +PT RV Sbjct: 7 SIEEAAAKLRAGDISSVELTQSCLQRIGDVEDRVKGFITVDEEGALAQAKAADKALQ--NGETNPLCGIPMSIKDLLAVKDLPMTCGS-KMLEKFIAPYNATIVDKLQGAGAVNLGKVTMDEFAMGSTSETCAFGVPQNPWKEGYVAGGSSGGSAVTVAAQECFFSIGTDTGGSIRQPAALCGVVGMKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DESAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18 Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 3 Query: 321 LKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 L +GE+SS +TT R + ALE A DE + G+ PL G+P+++KD G +TT + +++ T ++ V +L + GAVI KTN+ + M ++N+ F T NP N GGSSGG A VA + +GTD GSIR P+ CG G +P+ RV Sbjct: 15 LLSGEISSKDLTTCLLDRIKTHDADLGAFITVDAAGALEAATAADERIA-RGEDA-PLLGIPLALKDLLCTSGVRTTCAS-KILENFVPTYDATAVTLLKQAGAVIVGKTNLDEFGMGSSTENSAFHLTRNPWNLDHVPGGSSGGSAAAVAARMCTAALGTDTGGSIRQPASHCGVVGLKPSYGRV 197 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |