FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_MOOTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 67/195 (34.36%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +A E++ L E+SS T A R A+ ++ + LT T QALE A+ +D G+ +GPL G+P+++KD +G +TT + ++ +V L E GAV+ K N+ + M ++N+ F T NP + GGSSGG A VA + +G+D GSIR P+ CG G +PT RV Sbjct: 7 TAHELSDLLNRKEISSEEATAAIIDRIEAVDGRVQAYLTRTA-EQALEEARAVDA-ARARGETLGPLAGVPMALKDNLCTEGVRTTCSS-RMLADWVPPYDATVVRRLKEAGAVMLGKLNMDEFAMGSSTENSSFFPTRNPWDLERVPGGSSGGAVAAVAAGEAYFALGSDTGGSIRQPASFCGVVGMKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_BACST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus stearothermophilus GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 63/195 (32.31%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 294 NSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +S +E+ L+ E+S + +R ++ QA +AK LD+ L G+ PL GLPI IKD KG +TT ++ + + ++ ++E L GA+ K N+ + M ++N+ F T NP + GGSSGG A VA P +G+D GSIR P+ CG G +PT RV Sbjct: 6 HSVSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQARAKAKELDDQLA-KGEETNPLFGLPIGIKDNIVTKGLRTTCA-IKILYNFDPIYDATVMERLNAAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLKRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THICR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira crunogena (strain XCL-2) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 66/193 (34.20%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T S E++ +L+ E++S+A+T + R +L + +T T A+E A+ DE + GK G L G+P++ KD F +TT G + + + A ++ +VE LG I KTN+ + M S+++ +G T NP + GGSSGG A++A +PL G+D GSIR P+ CG G +PT Sbjct: 3 TLSVKEMSEKLRNKEITSVALTQHYLDRIDQYDGELNAYVTVTP-ELAMEMARQADEMIA-EGKG-GLLTGIPVAHKDIFCTLDVKTTCGS-KMLDNFIAPYDAKVVEASRALGMPILGKTNMDEFAMGSSSESSYYGATKNPWDLKAVPGGSSGGSAAVIAAGLAPLATGSDTGGSIRQPASFCGITGIKPT 191
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PROA2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 58/195 (29.74%), Postives = 103/195 (52.82%), Query Frame = 3 Query: 294 NSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +S ++ +L E+S AV TA+ +R + ++ + +AL +A+ LD L+ G+ G L G+P++IKD ++G T + + + A ++ ++ L E AV K N+ + M ++N+ FG NP++++ GGSSGG A VA + + +G+D GS+R P+ C G +PT R+ Sbjct: 4 SSYRDLREKLLAREMSCEAVVTAYLQRIEATRDRNIYIS-VFYDEALRQARSLDRKLDA-GETPGKLFGMPMAIKDNISIEGTGLTCAS-KILSNYTAVYDATVIRRLKEEDAVFLGKVNMDEFAMGSSNENSSFGPVPNPYDSTKVPGGSSGGSAAAVAGDLALVALGSDTGGSVRQPAGFCNVVGLKPTYGRI 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_PERMH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S E+ ++ E+ V +FA+R + + QA+ERAK LDE + + + L G+PI+IKD +G +TT + +++ ++ +++ L + VI KTN+ + M ++N+ F T NP + GGSSGG A V+ +P +G+D GSIR P+ CG G +PT RV Sbjct: 7 SIKELKELIEKKEVKPSEVIESFAQRTKDVEVKIKSYVTDLTEQAVERAKQLDEKISDLSE-IPELFGIPIAIKDNISTEGIRTTCSS-KILENYVPPFDATVIKRLKDKEYVITGKTNLDEFAMGSSTENSAFFVTRNPWDLDRVPGGSSGGSAAAVSAGLAPAALGSDTGGSIRQPAAFCGVIGLKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_NOSP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 S E+ +QL E S++ +T +R A+ +L S L T +ALE+A +D + G+ +G L G+P+ IKD KG TT +++ S + L + GAV+ KTN+ + M ++N+ + T NP N S GGSSGG A V+ + + +G+D GSIR P+ CG G +PT Sbjct: 3 SIRELHQQLVKKERSAVEITQEALERIEALEPKLHSFLCVTA-ERALEQAGAVDAKIAA-GEEIGLLAGIPVGIKDNLCTKGIPTTCAS-RILENFVPPYESTATQKLADAGAVMVGKTNLDEFAMGSSTENSAYQVTANPWNLSRVPGGSSGGSAAAVSSQECVVALGSDTGGSIRQPASFCGVVGMKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_HELMI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T +A E+ L E+S+ + A R + +ALE+A +D + G+ +GPL G+P++IKD G +TT + + + ++ +V L E GAV+ KTN+ + M ++N+ F T NP + GGSSGG A VA + +G+D GSIR P+ CG G +PT Sbjct: 5 TKTAHELHDLLVRKEVSATEIVKTQADRMQALEPKIRAFVTLTVDKALEQAARVDAKIAA-GEAIGPLEGIPMAIKDNMCTDGVRTTCSS-KILNNFVPPYDATVVTKLKEAGAVMMGKTNLDEFAMGSSTENSGFFATCNPWDIERVPGGSSGGSAASVAAGQAVFSLGSDTGGSIRQPAAFCGVVGLKPT 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CORJK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium jeikeium (strain K411) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 59/192 (30.73%), Postives = 92/192 (47.92%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T +A E+A ++ E+SS VT A R +AL A +D+ L +P L G+P+++KD F TT + ++ + ++ + L G I KTN+ + M ++N+ +G T NP++ T GGS GG A +A +PL +GTD GSIR P+ T G +PT Sbjct: 18 TWTAAELAEKIHAREISSQEVTQAHLDRIGEIDGDIHAFLHVGADEALAAASNVDDALAAGDQPTSKLAGVPLALKDVFTTTDAPTTCAS-KMLEGYMSPYDATVTMRLRAAGIPILGKTNMDEFAMGSSTENSAYGATKNPYDLERTPGGSGGGSSAALAAGMAPLAIGTDTGGSIRQPAALTNTVGVKPT 208
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CLOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 3 Query: 300 ATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 A E+ + E+S VT A + + +AL AK LDE L G+ +G L G P+ IKD VK Q T + ++ + ++ + E + G VI K N+ + M ++N+ + T NP + GGSSGG A VA K PL +GTD GS+R P+ CG G +PT RV Sbjct: 8 AHELKDLISKKEVSVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKALDEKLS-KGEDIGLLGGAPLGIKDNISVKNMQNTCAS-KILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRV 198
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_ACIAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp. (strain ADP1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18 Identity = 70/195 (35.90%), Postives = 96/195 (49.23%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S E+A L + SS +T + R I Q+ S +T T QAL +A D + G L G+P++ KD F KG +TTAG + + + + N+ +VE G V K N+ + M S+++ FG T NP GGSSGG A VA +P GTD GSIR P+ CG G +PT RV Sbjct: 8 SVRELAEGLGQAQFSSRELTQHYLNRIDKIDAQVKSYVTVT-HEQALAQADAADALRQAGN--AGFLTGVPLAHKDIFCTKGIKTTAGS-KMLDNFISPYNATVVEKANAAGLVTLGKLNMDEFAMGSTSESSYFGATCNPWALDRVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRV 198 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |