FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SALAI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinispora arenicola (strain CNS-205) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21 Identity = 66/190 (34.74%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+A + GE S+ VT A R AL+ A+ +D G+P+GPL G+P+++KD KG TTAG + +S +V L G V+ KTN+ + M ++ + FG T NP + S GGS GG A +A +PL +G+D GSIR P GT G +PT Sbjct: 8 SAAELAGLVARGESSAAEVTQAHLDRITAVDDRVHAFLHVDTEGALDAARAVDAR-RAAGEPLGPLAGVPVAVKDVLTTKGIPTTAGS-RILAGWRPPYDSTIVRRLRAAGTVMLGKTNMDEFAMGSSTEYSAFGPTHNPWDLSRIPGGSGGGSAAALAAYETPLSIGSDTGGSIRQPGAVTGTVGVKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_GEOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21 Identity = 69/192 (35.94%), Postives = 101/192 (52.60%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ +LK E+SS+ T A R A+ Q+ + +T T QAL +A+ D + + PL G+P+ +KD F KG +TT G +++ + V L E GAVI K N + M ++++ FG NP + S T GGSSGG A +A + + +GTD GSIR P+ CG G +PT RV Sbjct: 10 ELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTP-EQALVQAEDADR--RIAAGEIAPLTGIPVGLKDIFVTKGIRTTCGS-RILENFVPPYDGTAVAKLKEQGAVIVGKLNQDEFAMGSSNESSYFGPCKNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_RHOE4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.711e-21 Identity = 65/192 (33.85%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 291 TNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 T A E+A ++ + E+SS+ VT A R A QALE A +D L +P L G+PI++KD F TT + ++ A ++ L L G I KTN+ + M ++N+ FG T NP + + GGS GG A +A + +PL +GTD GSIR P+ T G +PT Sbjct: 6 TLDAAELAGKIHSREVSSVEVTQAHLDRIAAVDTEYHAFLHVAGEQALEAAAAVDNSLAGGNEPASALAGVPIALKDIFTTTDMPTTCAS-KILEGWVAPYDATLTSKLRAAGIPILGKTNLDEFAMGSSTENSAFGPTRNPWDVTRIPGGSGGGSAAALASRQAPLAIGTDTGGSIRQPAAVTATVGTKPT 196
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_METCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylococcus capsulatus GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.711e-21 Identity = 68/191 (35.60%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+A L+ E SS+ +T A R + T AL +A+ DE L GPL G+PI+ KD F KG +T+ G + + ++C+VE GAV+ K N+ + M ++ + +G NP NT+ GGSSGG A VA + P GTD GSIR P+ CG G +PT RV Sbjct: 8 ELAAGLERREFSSVELTQAHLARIERLDPALNSFITTTPEIALAQARAADE--RLAKGEAGPLTGIPIAQKDIFCTKGVRTSCGS-RMLDSFVSPYDACVVERFNAAGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWNTATVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAAFCGITGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_LAWIP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.711e-21 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 3 Query: 264 SSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 S + L + + ++ I+R+ E++ + A I +T C E AL AK LD+ P PL G+PI++KD K TTA +KH ++ +++ L GA+I KTN+ + M ++ + FG T NP NT GGSSGG A VA +GTD GSIR P+ CG G +PT RV Sbjct: 3 SDIHLSLAQIHNLL-ISREKSVEEVTQACLDRIIATEPTINAFITICAEE-----ALSEAKKLDQSTP---DPKKPLWGIPIAVKDNILTKNIPTTAASC-MLKHFIPQYDAFIIQQLKNAGAIIIGKTNLDEFAMGSSTETSFFGPTYNPWNTKCVPGGSSGGSAASVAAFQCFSAIGTDTGGSIRQPAALCGCIGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_GEOSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp. (strain M21) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.711e-21 Identity = 69/192 (35.94%), Postives = 101/192 (52.60%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E+ +LK E+SS+ T A R A+ Q+ + +T T QAL +A+ D + + PL G+P+ +KD F KG +TT G +++ + V L E GAVI K N + M ++++ FG NP + S T GGSSGG A +A + + +GTD GSIR P+ CG G +PT RV Sbjct: 10 ELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTP-EQALVQAQDADR--RIAAGEIAPLTGVPVGLKDIFVTKGIRTTCGS-RILENFVPPYDGTAVAKLKEQGAVIVGKLNQDEFAMGSSNESSYFGPCRNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLKPTYGRV 197
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CYAP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 8801) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.711e-21 Identity = 70/191 (36.65%), Postives = 104/191 (54.45%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKR-AAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 S E+ +QL E S++ +TT +R AAI Q+ S L T +ALE AK +D+ + + +G L G+PI IKD KG TT G +++ S + + L E+GAV+ KTN+ + M ++N+ + T NP + GGSSGG A VA + + +G+D GSIR P+ CG G +PT Sbjct: 3 SIRELHQQLINKERSAVEITTEALERIAAIEPQVKSFLCITA-DRALETAKAVDQKIAAK-EEIGLLAGIPIGIKDNMSTKGIPTTCGS-RILENFIPPYESTVTQKLQEIGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASLCGVVGLKPT 190
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYNS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9311) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21 Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E +QL++GE+S+ +T R E +A A LDE G+ + PL G+PI+IKD KG +TT+ ++ S + + L GAV+ KTN+ + M G ++ + FG T NP NT GGSSGG A VA +G+D GSIR P+ CG G +PT RV Sbjct: 5 EWRQQLESGEVSARELTDHHLARIKAVDSSVHAFLEVTADRARADADRLDE-ARAAGEDLPPLAGVPIAIKDNLCTKGIRTTSSS-RMLESFVPPYESTVTDRLWRSGAVLIGKTNLDEFAMGGSTETSAFGPTANPWNTGYVPGGSSGGSAAAVAAGECMASLGSDTGGSIRQPASFCGVVGLKPTYGRV 193
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_SYMTH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Symbiobacterium thermophilum GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21 Identity = 63/190 (33.16%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA + R GELS++ + + R A + +ERAK LD + +GPL G+PI++KD G +TT +K + ++ +VE L GA+I K N+ + M +++ FG T NP + GGSS G A VA +PL +GTD GSIR P+ G G +PT Sbjct: 3 SAARLNRLFLAGELSAVEIAESALSRIAQVEPAVGAFITVAADHVIERAKKLDARRKAGDTELGPLAGVPIAVKDNICTSGMETTCAS-RILKGYVSPFDATVVERLRAAGAMIIGKANMDEFAMGSSGESSAFGVTRNPWDLERVPGGSSSGSAAAVAAGEAPLALGTDTGGSIRQPAAFTGIVGLKPT 191
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THEP3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gatA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.035e-21 Identity = 64/187 (34.22%), Postives = 100/187 (53.48%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 E+ LK E+S+L VT ++ +R + L AL+RAK DE ++ +G+ L G+P+ IKD +G +TT + +++ N+ +VE LLE G +I K+N+ + M ++N+ F T NP + S GGSSGG A +A + +G+D GSIR P+ CG G +PT Sbjct: 10 ELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQRAKEADEKIK-NGEDTA-LTGIPVIIKDNISTEGIKTTCSS-KMLENYIPPYNATVVEKLLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPT 193 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |