FC877989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_EUBE2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.035e-21 Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 +A E+A ++K GE ++ A + ++ +C +AL AK DE ++ GK GPL G+P +IKD +G TT + + + T + VE L GAVI KTN+ + M ++ + FG T NP N GGSSGG A VA +G+D GSIR P+ CG G +PT Sbjct: 7 TAVELAAKIKAGETTATEAMEAVIAQIEKSEDELNCYVTFDKEKALAAAKKADEDIKA-GKLTGPLAGVPFAIKDNMCTEGMLTTCSS-KILGNFVPTYTADAVERLQNAGAVIIGKTNMDEFAMGSTTETSAFGATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCGVVGLKPT 194
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CORDI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium diphtheriae GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20 Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA E+A ++ + E++S VT A R +AL A +DE L+ P L G+P+++KD F TT + ++ A ++ + + + E G I KTN+ + M ++N+ +G TLNP + T GGS GG A +A +PLG+GTD GSIR P+ T G +PT Sbjct: 15 SAAELAEKIHSREVTSREVTQAHLDRINDVDGTLHAFLHVGVEEALAAADAVDESLDKGEAPASALAGVPLALKDVFVTTDAPTTCAS-KMLEGYVAPYDATVTKKIREAGIPILGKTNMDEFAMGSSTENSAYGPTLNPWDIERTPGGSGGGTSAALASGEAPLGIGTDTGGSIRQPAALTNTVGVKPT 203
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CLOPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20 Identity = 70/198 (35.35%), Postives = 106/198 (53.54%), Query Frame = 3 Query: 276 LQITETNSATEIARQLKTGELS-SLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 ++IT+ +A E+++++K ELS AV F+ S +T +ALE+A + +E PL G+PI+IKD VKG +TT + ++ N+ ++E L + GA+I KTN+ + M ++ + FG T NP N GGSSGG A VA + + + +GTD GSIR PS CG G +PT Sbjct: 1 MEITKL-TAIELSKKIKQKELSVEEAVKATFSAIKKREPYYHSYITVNE-EEALEQASKIQIAIEAGKFADSPLAGVPIAIKDNICVKGMRTTCAS-KILEDFIPPYNASVIERLKDAGAIILGKTNMDEFAMGSTTETSYFGATKNPWNIECIPGGSSGGSAAAVAAEEAFIALGTDTGGSIRQPSAFCGVTGIKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_TERTT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 EI+R+L+ E SS +T F R +C A+ +AK D L P + G+P + KD F G +TT G + + + N+ +VE + GAV+ KTN+ + M ++ + FG NP +T+ GGSSGG A VA + +P TD GSIR P+ CG G +PT RV Sbjct: 8 EISRKLQAKEFSSEEITRYFLDRIKQQDPTYNCYVTVTEELAMAQAKAADARLAAGNAPT--MCGVPFAHKDIFCTNGVKTTCGS-KMLDNFVPPYNATVVENYINEGAVMLGKTNMDEFAMGSSNETSYFGPVKNPWDTNCVPGGSSGGSAAAVAARMAPGATATDTGGSIRQPAALCGITGIKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_RENSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20 Identity = 65/190 (34.21%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA +A +L +GE++S+ VT A+ R A+ + +AL A +D GK + L G+PI+IKD KG+ TTAG + ++ + ++ ++E + I KTN+ + M ++++ FG T NP + + GGS GG A VA +PL +GTD GSIR P GT G +PT Sbjct: 8 SAAALAAKLASGEVTSVQVTQAYLDRIALVDGELNAFLHLNAEEALRVAAEVDAD-RAAGKELHELAGVPIAIKDLIVTKGQPTTAGS-KILEGWISPYDATVIEKIRAAKMPILGKTNLDEFAMGSSTEHSAFGPTRNPWDLTRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKPT 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20 Identity = 68/201 (33.83%), Postives = 99/201 (49.25%), Query Frame = 3 Query: 282 ITETNSATEIARQ--LKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +TE + T A Q L G+++++ +T A R + AL A+ DE + G+ +GPL G+PI+IKD G TTAG + N+ ++E L+ GAV+ K N + M ++N+ + T NP + + GGSSGG A VA P +GTD GSIR P+ CG G +PT RV Sbjct: 1 MTELHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQ-QGRSLGPLDGIPIAIKDVICTDGVPTTAGS-RILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRV 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20 Identity = 68/201 (33.83%), Postives = 99/201 (49.25%), Query Frame = 3 Query: 282 ITETNSATEIARQ--LKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 +TE + T A Q L G+++++ +T A R + AL A+ DE + G+ +GPL G+PI+IKD G TTAG + N+ ++E L+ GAV+ K N + M ++N+ + T NP + + GGSSGG A VA P +GTD GSIR P+ CG G +PT RV Sbjct: 1 MTELHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQ-QGRSLGPLDGIPIAIKDVICTDGVPTTAGS-RILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRV 199
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_THISH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 306 EIARQLKTGELSSLAVTTAFAKRA-AIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 E++ L GE SS+ +T F KR A+ L S +T T QAL +AK D+ G+ GPL G+P++ KD F G +TT G + + + A ++ +VE G + KTN+ + M ++ + G NP +T+ GGSSGG A VA + +P GTD GSIR P+ CG G +PT RV Sbjct: 8 ELSAALTKGECSSVELTEHFLKRIEALDGGLNSFVTVTA-EQALAQAKAADDR-RARGE-AGPLTGVPMAQKDIFCTDGVRTTCGS-KMLDNFIAPYDATVVERFKAEGCPMLGKTNMDEFAMGSSNETSFHGPVKNPWDTARVPGGSSGGSAAAVAARLTPSATGTDTGGSIRQPAALCGITGLKPTYGRV 195
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_FRASC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Frankia sp. (strain CcI3) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 63/190 (33.16%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 297 SATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPT 866 SA A + G LS++ T A R A + AL A+ +D+ G+ +GPL G+P+++KD F +G TT G ++ ++ +V L V+ K N+ + M ++N+ FG T NP + + GGSSGG A VA +PL +GTD GSIR P+ CG G +PT Sbjct: 21 SAAATAAAIAVGRLSAVEATRAALDRIAKVDETVHAFLHVDADGALAAARSVDDR-RAAGERLGPLAGVPLALKDVFTTRGMPTTCGS-RILEGWHPPYDATVVSRLRAADVVLLGKANMDEFAMGSSTENSAFGPTRNPWDVTRIPGGSSGGSAAAVAAFEAPLALGTDTGGSIRQPAALCGLVGVKPT 208
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: GATA_DEIGD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20 Identity = 66/199 (33.17%), Postives = 111/199 (55.78%), Query Frame = 3 Query: 282 ITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878 ++E ++AT++AR ++ E + A+ A +RA A+ L + ++ + +A E+A + L+ G+ + PL G+PI +KD V G +TT G + + + ++ VE L GAVI K N+ + M ++++ +G TLNP + GGSSGG VA +P+ +G+D GS+R P+ G YG +PT RV Sbjct: 1 MSECSTATDLARAVQARETTPQALLEAARRRAEAARDLNALIS--LNDRADEQAARVQVRLDA-GETL-PLAGVPIVVKDNLNVIGTRTTCGS-RILANYVSPYDATAVERLTGAGAVIIGKANMDEFAMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRV 194 The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bpback to top |